RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 LMLNQ96KR4 655 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 TSGA13Q96PP4 275 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 ACE2Q9BYF1 805 aaPredicted RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 ECT2Q9H8V3 914 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 KIF9Q9HAQ2 790 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 PCDH9Q9HC56 1237 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 NT5MQ9NPB1 228 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 UBAP1Q9NZ09 502 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 KLHL8Q9P2G9 620 aaPredicted RBP10.48□□□□□ -0.73
USP39-210ENST00000459775 VPS51Q9UID3 782 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 ZMYM5Q9UJ78 669 aa10.48□□□□□ -0.73
USP39-210ENST00000459775 A0A0A0MRY4 1105 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 TYW5A2RUC4 315 aaKnown RBP10.47□□□□□ -0.73
USP39-210ENST00000459775 HACD1B0YJ81 288 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 PROB1E7EW31 1015 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 MATN3O15232 486 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 NCAM2O15394 837 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 PRAMEF11O60813 436 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 USP12O75317 370 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 AVILO75366 819 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 GCATO75600 419 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 ZMPSTE24O75844 475 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 SEC31AO94979 1220 aaKnown RBP10.47□□□□□ -0.73
USP39-210ENST00000459775 SNUPNO95149 360 aaKnown RBP10.47□□□□□ -0.73
USP39-210ENST00000459775 MT-CYBP00156 380 aaPredicted RBP10.47□□□□□ -0.73
USP39-210ENST00000459775 NFKB1P19838 968 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 YBEYP58557 167 aaPredicted RBP10.47□□□□□ -0.73
USP39-210ENST00000459775 ZXDAP98168 799 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 KDSRQ06136 332 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 SIGLEC14Q08ET2 396 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 FCHO2Q0JRZ9 810 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 TEX44Q53QW1 395 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 ARMC4Q5T2S8 1044 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 IZUMO3Q5VZ72 239 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 CCNI2Q6ZMN8 369 aaPredicted RBP10.47□□□□□ -0.73
USP39-210ENST00000459775 BZW1Q7L1Q6 419 aaKnown RBP10.47□□□□□ -0.73
USP39-210ENST00000459775 SETD3Q86TU7 594 aaPredicted RBP10.47□□□□□ -0.73
USP39-210ENST00000459775 NKAIN3Q8N8D7 197 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 CPT1BQ92523 772 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 RTP4Q96DX8 246 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 SPATA13Q96N96 652 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 MAGEH1Q9H213 219 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 MTG2Q9H4K7 406 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 PDFQ9HBH1 243 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 FBRSL1Q9HCM7 1045 aaKnown RBP10.47□□□□□ -0.73
USP39-210ENST00000459775 ZDHHC18Q9NUE0 388 aa10.47□□□□□ -0.73
USP39-210ENST00000459775 FCF1Q9Y324 198 aaKnown RBP10.47□□□□□ -0.73
USP39-210ENST00000459775 C5orf60A6NFR6 353 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 KDELR3O43731 214 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 TULP3O75386 442 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 TMEM63AO94886 807 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 LMNB2Q03252 620 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 ITKQ08881 620 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 TCF15Q12870 199 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 PITRM1Q5JRX3 1037 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 MPP7Q5T2T1 576 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 FBXO38Q6PIJ6 1188 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 ARHGEF18Q6ZSZ5 1173 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 ADIPOR2Q86V24 386 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 YAF2Q8IY57 180 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 SLC7A5P1Q8MH63 180 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 OR6K2Q8NGY2 324 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 CYB5D2Q8WUJ1 264 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 SEC14L1Q92503 715 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 NXPE3Q969Y0 559 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 ELSPBP1Q96BH3 223 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 NECTIN4Q96NY8 510 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 APOL2Q9BQE5 337 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 TRMT61BQ9BVS5 477 aaKnown RBP10.46□□□□□ -0.73
USP39-210ENST00000459775 RAB17Q9H0T7 212 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 SLCO3A1Q9UIG8 710 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 GGA2Q9UJY4 613 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 RAD54BQ9Y620 910 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 SHROOM3Q8TF72 1996 aa10.46□□□□□ -0.73
USP39-210ENST00000459775 COL4A3Q01955 1670 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 TARSL2A2RTX5 802 aaKnown RBP10.46□□□□□ -0.74
USP39-210ENST00000459775 LOC730098B7Z3J9 87 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 ANHXE9PGG2 379 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 SLC9A3R1O14745 358 aaPredicted RBP10.46□□□□□ -0.74
USP39-210ENST00000459775 NARSO43776 548 aaKnown RBP10.46□□□□□ -0.74
USP39-210ENST00000459775 APRTP07741 180 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 HSD17B7P56937 341 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 DSC2Q02487 901 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 IL10RBQ08334 325 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 NIPAL4Q0D2K0 466 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 RUNX3Q13761 415 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 CYTH1Q15438 398 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 RNF43Q68DV7 783 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 RASSF3Q86WH2 238 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 IFT20Q8IY31 132 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 ZNF366Q8N895 744 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 PDCD7Q8N8D1 485 aaKnown RBP10.46□□□□□ -0.74
USP39-210ENST00000459775 PPHLN1Q8NEY8 458 aaKnown RBP10.46□□□□□ -0.74
USP39-210ENST00000459775 LILRB1Q8NHL6 650 aaPredicted RBP10.46□□□□□ -0.74
USP39-210ENST00000459775 BRSK1Q8TDC3 778 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 SNF8Q96H20 258 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 OXNAD1Q96HP4 312 aaPredicted RBP10.46□□□□□ -0.74
USP39-210ENST00000459775 TEKT5Q96M29 485 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 IL12RB2Q99665 862 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 MLPHQ9BV36 600 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms