RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 PSMC3IPQ9P2W1 217 aaPredicted RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 FETUBQ9UGM5 382 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 ERVW-1Q9UQF0 538 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 SLC27A6Q9Y2P4 619 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 MRPS17Q9Y2R5 130 aaKnown RBP5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 SLC30A1Q9Y6M5 507 aa5.9□□□□□ -1.46
RNU1-88P-201ENST00000459274 NOTCH4Q99466 2003 aa5.9□□□□□ -1.47
RNU1-88P-201ENST00000459274 EPOPA6NHQ4 379 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 ANKRD66B4E2M5 251 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 E7ESA3 106 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 MAN2B1O00754 1011 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 SNAP91O60641 907 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 SOCS5O75159 536 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 USP12O75317 370 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 AVILO75366 819 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TULP3O75386 442 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 MOSPD3O75425 235 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 PAPLNO95428 1278 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 CYP17A1P05093 508 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 SNRPAP09012 282 aaKnown RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 GLULP15104 373 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TPH1P17752 444 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 LPOP22079 712 aaPredicted RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 HLA-FP30511 346 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 SSTR1P30872 391 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 CD70P32970 193 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TNFRSF4P43489 277 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 GRIA4P48058 902 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 CCT5P48643 541 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 KPNA2P52292 529 aaKnown RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TNK2Q07912 1038 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 FCHO2Q0JRZ9 810 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 ELP6Q0PNE2 266 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 SMAD4Q13485 552 aaKnown RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 GRM2Q14416 872 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 POU6F1Q14863 301 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TMED2Q15363 201 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TAF1AQ15573 450 aaPredicted RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 DLG2Q15700 870 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 MYLK3Q32MK0 819 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 EML3Q32P44 896 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 FASTKD1Q53R41 847 aaKnown RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 FSCBQ5H9T9 825 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 FNBP1LQ5T0N5 605 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 GRTP1Q5TC63 336 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 AGBL2Q5U5Z8 902 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 LYPLAL1Q5VWZ2 237 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 ANKRD22Q5VYY1 191 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TANGO2Q6ICL3 276 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 CXorf57Q6NSI4 855 aaKnown RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 C22orf39Q6P5X5 142 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 PKN3Q6P5Z2 889 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 FBXL19Q6PCT2 694 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 BRAT1Q6PJG6 821 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TAX1BP1Q86VP1 789 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 KCNMB4Q86W47 210 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 SLC26A11Q86WA9 606 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 RALGPS2Q86X27 583 aaPredicted RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TP53INP2Q8IXH6 220 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 IQCKQ8N0W5 287 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 PPM1NQ8N819 430 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 KDM1BQ8NB78 822 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 SMRP1Q8NCR6 262 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 LPCAT1Q8NF37 534 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 KCNV2Q8TDN2 545 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 HCAR2Q8TDS4 363 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 ADAMTS19Q8TE59 1207 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 FBF1Q8TES7 1133 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 GANCQ8TET4 914 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 STYXQ8WUJ0 223 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 SCG3Q8WXD2 468 aaKnown RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 ALKBH8Q96BT7 664 aaKnown RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TSPAN17Q96FV3 270 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 PGM2Q96G03 612 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 MYO19Q96H55 970 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 SHDQ96IW2 340 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 CABS1Q96KC9 395 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 ATP6V1G3Q96LB4 118 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 CPNE1Q99829 537 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 P2RY13Q9BPV8 354 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 APOL2Q9BQE5 337 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 PHF7Q9BWX1 381 aaPredicted RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TSSK1BQ9BXA7 367 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TM6SF2Q9BZW4 377 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 NEUROG2Q9H2A3 272 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 NOL6Q9H6R4 1146 aaKnown RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 ARNT2Q9HBZ2 717 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 MRM3Q9HC36 420 aaKnown RBP5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 LRRC4CQ9HCJ2 640 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 CASS4Q9NQ75 786 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 ELOVL2Q9NXB9 296 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 KCTD5Q9NXV2 234 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 NINJ2Q9NZG7 142 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 VPS18Q9P253 973 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 IL36AQ9UHA7 158 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TBK1Q9UHD2 729 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 APPL1Q9UKG1 709 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 TLK1Q9UKI8 766 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 PHTF1Q9UMS5 762 aa5.89□□□□□ -1.47
RNU1-88P-201ENST00000459274 SOX13Q9UN79 622 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms