RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 SDR16C5Q8N3Y7 309 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 GPT2Q8TD30 523 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 HCAR2Q8TDS4 363 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 FAM172AQ8WUF8 416 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 NAF1Q96HR8 494 aaKnown RBP21.81■■□□□ 1.08
CPNE1-220ENST00000458038 SLC46A1Q96NT5 459 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 CPEB1Q9BZB8 566 aaKnown RBP21.81■■□□□ 1.08
CPNE1-220ENST00000458038 GANQ9H2C0 597 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 CAAP1Q9H8G2 361 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 NEU3Q9UQ49 428 aa21.81■■□□□ 1.08
CPNE1-220ENST00000458038 ASH1LQ9NR48 2969 aaKnown RBP21.8■■□□□ 1.08
CPNE1-220ENST00000458038 FAM170AA1A519 330 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 TMEM110-MUSTN1A8MSY1 372 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 TMCC1O94876 653 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 IGSF6O95976 241 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 CHRNB2P17787 502 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 NSFP46459 744 aaKnown RBP21.8■■□□□ 1.08
CPNE1-220ENST00000458038 PEX5P50542 639 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 HDAC4P56524 1084 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 POLR2FP61218 127 aaKnown RBP21.8■■□□□ 1.08
CPNE1-220ENST00000458038 GRM3Q14832 879 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 RAB6CQ53S08 254 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 TPRG1LQ5T0D9 272 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 C6orf132Q5T0Z8 1188 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 FAXCQ5TGI0 409 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 ESRP1Q6NXG1 681 aaKnown RBP21.8■■□□□ 1.08
CPNE1-220ENST00000458038 LVRNQ6Q4G3 990 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 SLFN11Q7Z7L1 901 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 ZNF605Q86T29 641 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 ZNF354CQ86Y25 554 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 FSTL5Q8N475 847 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-220ENST00000458038 JOSD2Q8TAC2 188 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 SLC30A5Q8TAD4 765 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 SLC20A1Q8WUM9 679 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 SNRNP27Q8WVK2 155 aaKnown RBP21.8■■□□□ 1.08
CPNE1-220ENST00000458038 SCG3Q8WXD2 468 aaKnown RBP21.8■■□□□ 1.08
CPNE1-220ENST00000458038 VOPP1Q96AW1 172 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 C11orf70Q9BRQ4 267 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 RAB6CQ9H0N0 254 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 NUP62CLQ9H1M0 184 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 DONSONQ9NYP3 566 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 GGT7Q9UJ14 662 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 SATB2Q9UPW6 733 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 ITM2BQ9Y287 266 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 SSUH2Q9Y2M2 353 aa21.8■■□□□ 1.08
CPNE1-220ENST00000458038 KLK10O43240 276 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 GCATO75600 419 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 CALB1P05937 261 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 UNGP13051 313 aaPredicted RBP21.79■■□□□ 1.08
CPNE1-220ENST00000458038 IGFALSP35858 605 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 AIF1P55008 147 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 ADKP55263 362 aaKnown RBP21.79■■□□□ 1.08
CPNE1-220ENST00000458038 JAM2P57087 298 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 PPARDQ03181 441 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 ELP6Q0PNE2 266 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 TAF1BQ53T94 588 aaPredicted RBP21.79■■□□□ 1.08
CPNE1-220ENST00000458038 FKBP15Q5T1M5 1219 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 ATXN7L2Q5T6C5 722 aaPredicted RBP21.79■■□□□ 1.08
CPNE1-220ENST00000458038 VPS36Q86VN1 386 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 ZNF843Q8N446 348 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 ARL14Q8N4G2 192 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 RTL3Q8N8U3 475 aaKnown RBP21.79■■□□□ 1.08
CPNE1-220ENST00000458038 ENOX1Q8TC92 643 aaKnown RBP21.79■■□□□ 1.08
CPNE1-220ENST00000458038 VCPIP1Q96JH7 1222 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 SELENOOQ9BVL4 669 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 CHMP5Q9NZZ3 219 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 ADAM22Q9P0K1 906 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 ENTPD2Q9Y5L3 495 aa21.79■■□□□ 1.08
CPNE1-220ENST00000458038 COL27A1Q8IZC6 1860 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-220ENST00000458038 ANKRD62A6NC57 917 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 MMP20O60882 483 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 GPD1P21695 349 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 XPAP23025 273 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-220ENST00000458038 EPHB2P29323 1055 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 RFC1P35251 1148 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-220ENST00000458038 EIF4A3P38919 411 aaKnown RBP21.78■■□□□ 1.08
CPNE1-220ENST00000458038 STAT1P42224 750 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 RHOAP61586 193 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 CFHR1Q03591 330 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 ELOCQ15369 112 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 PARP15Q460N3 678 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 C3orf38Q5JPI3 329 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 EFHC2Q5JST6 749 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 PHF13Q86YI8 300 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-220ENST00000458038 SLC35F3Q8IY50 421 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 CCDC185Q8N715 623 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 C3orf20Q8ND61 904 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 WDR36Q8NI36 951 aaKnown RBP21.78■■□□□ 1.08
CPNE1-220ENST00000458038 ATXN7L3BQ96GX2 97 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 CATSPERBQ9H7T0 1116 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 TAB2Q9NYJ8 693 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 PADI4Q9UM07 663 aa21.78■■□□□ 1.08
CPNE1-220ENST00000458038 SIGLEC16A6NMB1 481 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 WASH4PA8MWX3 477 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 MUSKO15146 869 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 ALPIP09923 528 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 TIMP2P16035 220 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 SKOR1P84550 965 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 VAC14Q08AM6 782 aa21.77■■□□□ 1.08
CPNE1-220ENST00000458038 PTP4A2Q12974 167 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms