RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SPATA22Q8NHS9 363 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRAF4-206ENST00000454852 OR8D1Q8WZ84 308 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 UBXN4Q92575 508 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 PRCCQ92733 491 aaPredicted RBP11.37□□□□□ -0.59
TRAF4-206ENST00000454852 ART4Q93070 314 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 FAM131CQ96AQ9 280 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 RBM15Q96T37 977 aaKnown RBP eCLIP11.37□□□□□ -0.591e-6■■■■□ 24
TRAF4-206ENST00000454852 FAM129BQ96TA1 746 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 FOXP3Q9BZS1 431 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 CHRDQ9H2X0 955 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 ATP13A3Q9H7F0 1226 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 ANKZF1Q9H8Y5 726 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 LMAN1LQ9HAT1 526 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 DKK3Q9UBP4 350 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 IL36AQ9UHA7 158 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 EVLQ9UI08 416 aaPredicted RBP11.37□□□□□ -0.59
TRAF4-206ENST00000454852 NDRG2Q9UN36 371 aaKnown RBP11.37□□□□□ -0.59
TRAF4-206ENST00000454852 SNX24Q9Y343 169 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 PPIL1Q9Y3C6 166 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 MTF2Q9Y483 593 aaPredicted RBP11.37□□□□□ -0.59
TRAF4-206ENST00000454852 TTLL3Q9Y4R7 772 aa11.37□□□□□ -0.59
TRAF4-206ENST00000454852 FAM170BA6NMN3 283 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 CTIFO43310 598 aaKnown RBP11.36□□□□□ -0.59
TRAF4-206ENST00000454852 GJB3O75712 270 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 PGLSO95336 258 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 KLF8O95600 359 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-206ENST00000454852 PRLP01236 227 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 CTSLP07711 333 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 APRTP07741 180 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 HOXB2P14652 356 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 HLA-DPA1P20036 260 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 ECHS1P30084 290 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 MAGEA3P43357 314 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 VPS41P49754 854 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 SUOXP51687 545 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 COPAP53621 1224 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 SEC13P55735 322 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 BASP1P80723 227 aaKnown RBP11.36□□□□□ -0.59
TRAF4-206ENST00000454852 GUCY2DQ02846 1103 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 ZBTB16Q05516 673 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 CDK18Q07002 472 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 BCL2L1Q07817 233 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 TRAF2Q12933 501 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 CALCOCO2Q13137 446 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 STARD3Q14849 445 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 FAM182AQ5T1J6 154 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 FAXCQ5TGI0 409 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 WDR93Q6P2C0 686 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 BRAT1Q6PJG6 821 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 ZDHHC24Q6UX98 284 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 TRIM67Q6ZTA4 783 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 ZNF534Q76KX8 674 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 GPR161Q8N6U8 529 aaKnown RBP11.36□□□□□ -0.59
TRAF4-206ENST00000454852 CHST14Q8NCH0 376 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 OR2T3Q8NH03 318 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 RPLP0P6Q8NHW5 317 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 FOXQ1Q9C009 403 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 MTG2Q9H4K7 406 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 SUV39H2Q9H5I1 410 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 EPB41L5Q9HCM4 733 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 XAB2Q9HCS7 855 aaKnown RBP11.36□□□□□ -0.59
TRAF4-206ENST00000454852 CASS4Q9NQ75 786 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 ZDHHC18Q9NUE0 388 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 RAI2Q9Y5P3 530 aa11.36□□□□□ -0.59
TRAF4-206ENST00000454852 TCRBV7S3A2A0A539 114 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 TTC24A2A3L6 582 aaPredicted RBP11.35□□□□□ -0.59
TRAF4-206ENST00000454852 E7EVH7 732 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 SYNCRIPO60506 623 aaKnown RBP11.35□□□□□ -0.59
TRAF4-206ENST00000454852 PPFIA2O75334 1257 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 PMPCBO75439 489 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 TMEM63AO94886 807 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 PAPSS2O95340 614 aaPredicted RBP11.35□□□□□ -0.59
TRAF4-206ENST00000454852 NDST3O95803 873 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 FGF1P05230 155 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 RHOXF2BP0C7M4 288 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 ATXN1LP0C7T5 689 aaKnown RBP11.35□□□□□ -0.59
TRAF4-206ENST00000454852 MCM3P25205 808 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 ITGB7P26010 798 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 GRIA4P48058 902 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 ITGA8P53708 1063 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 SARNPP82979 210 aaKnown RBP11.35□□□□□ -0.59
TRAF4-206ENST00000454852 MSLNQ13421 630 aaPredicted RBP11.35□□□□□ -0.59
TRAF4-206ENST00000454852 GAS6Q14393 721 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 UBXN2BQ14CS0 331 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 SLC1A5Q15758 541 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 CRY1Q16526 586 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 ERCC6LQ2NKX8 1250 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 ZNF805Q5CZA5 627 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 FAM46CQ5VWP2 391 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 ANKRD22Q5VYY1 191 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 CWF19L1Q69YN2 538 aaKnown RBP11.35□□□□□ -0.59
TRAF4-206ENST00000454852 DENND5AQ6IQ26 1287 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 LRRC8BQ6P9F7 803 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 GDPD4Q6W3E5 623 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 PPP1R21Q6ZMI0 780 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 CAMK1DQ8IU85 385 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 STK40Q8N2I9 435 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 SPEM1Q8N4L4 309 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 ZNF366Q8N895 744 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms