RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 SNRNP25Q9BV90 132 aaKnown RBP17.29■□□□□ 0.36
TNFRSF4-202ENST00000453580 SP110Q9HB58 689 aa17.29■□□□□ 0.36
TNFRSF4-202ENST00000453580 CBX8Q9HC52 389 aa17.29■□□□□ 0.36
TNFRSF4-202ENST00000453580 GPR27Q9NS67 375 aa17.29■□□□□ 0.36
TNFRSF4-202ENST00000453580 DNAJC28Q9NX36 388 aa17.29■□□□□ 0.36
TNFRSF4-202ENST00000453580 PCSK1NQ9UHG2 260 aa17.29■□□□□ 0.36
TNFRSF4-202ENST00000453580 LUC7L2Q9Y383 392 aaKnown RBP17.29■□□□□ 0.36
TNFRSF4-202ENST00000453580 CSNK1G3Q9Y6M4 447 aa17.29■□□□□ 0.36
TNFRSF4-202ENST00000453580 KNTC1P50748 2209 aa17.29■□□□□ 0.36
TNFRSF4-202ENST00000453580 GOLGA4Q13439 2230 aaKnown RBP17.29■□□□□ 0.36
TNFRSF4-202ENST00000453580 TDRD6O60522 2096 aaKnown RBP17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 TMEM110-MUSTN1A8MSY1 372 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 H3BRJ5 948 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 ATMINO43313 823 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 SDC3O75056 442 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 PALMO75781 387 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 PIAS2O75928 621 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 SERPINA4P29622 427 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 CLDN2P57739 230 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 POLR2LP62875 67 aaKnown RBP17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 NSUN2Q08J23 767 aaKnown RBP eCLIP17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 BBS5Q8N3I7 341 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 ATL2Q8NHH9 583 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 NXPE2Q96DL1 559 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 BMFQ96LC9 184 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 SUV39H2Q9H5I1 410 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 ATP13A3Q9H7F0 1226 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 MYO1AQ9UBC5 1043 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 LCMT1Q9UIC8 334 aa17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 ARID1BQ8NFD5 2236 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF4-202ENST00000453580 IGF2RP11717 2491 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 A0A1W2PQ67 120 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 RNF103O00237 685 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 SCAMP1O15126 338 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 LRCH4O75427 683 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 CSF2P04141 144 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 NME1P15531 152 aaKnown RBP17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 ERCC2P18074 760 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 GKP32189 559 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 SERPINB6P35237 376 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 ABL2P42684 1182 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 PAPOLAP51003 745 aaKnown RBP17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 IL10RBQ08334 325 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 DNAJC3Q13217 504 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 PDE1CQ14123 709 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 CYTH1Q15438 398 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 PROX2Q3B8N5 592 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 TMEM52BQ4KMG9 183 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 LUZP1Q86V48 1076 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 SLC25A45Q8N413 288 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 PAF1Q8N7H5 531 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 FAM181AQ8N9Y4 354 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 TBATAQ96M53 351 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 ZNF599Q96NL3 588 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 KLF6Q99612 283 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 CINPQ9BW66 212 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 SLC39A8Q9C0K1 460 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 PDFQ9HBH1 243 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 GPATCH2LQ9NWQ4 482 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 LHX3Q9UBR4 397 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 IP6K2Q9UHH9 426 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 CAPN11Q9UMQ6 739 aa17.27■□□□□ 0.36
TNFRSF4-202ENST00000453580 TSPAN11A1L157 253 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 CFAP69A5D8W1 941 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 POM121BA6NF01 834 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 TRABD2BA6NFA1 517 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 SIGLEC6O43699 453 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 GP1BAP07359 652 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 SKILP12757 684 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 HSPA9P38646 679 aaKnown RBP17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 PEX5P50542 639 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 BLKP51451 505 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 FGL2Q14314 439 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 UGP2Q16851 508 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 ZCCHC8Q6NZY4 707 aaKnown RBP17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 SLC22A18ASQ8N1D0 253 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 NSMCE1Q8WV22 266 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 TEKT4Q8WW24 435 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 GLMNQ92990 594 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 CENPTQ96BT3 561 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 KLC2Q9H0B6 622 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 HAUS2Q9NVX0 235 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 SPASTQ9UBP0 616 aa17.26■□□□□ 0.35
TNFRSF4-202ENST00000453580 DFFAO00273 331 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 TPP1O14773 563 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 CAPNS1P04632 268 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 CKMT1AP12532 417 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 TIMP2P16035 220 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 HTR1BP28222 390 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 PFN3P60673 137 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 AP1S1P61966 158 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 BCL2L1Q07817 233 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 FZD2Q14332 565 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 LRRC14Q15048 493 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 NFKBIBQ15653 356 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 DPYSL2Q16555 572 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 HADHQ16836 314 aaKnown RBP17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 AFMIDQ63HM1 303 aa17.25■□□□□ 0.35
TNFRSF4-202ENST00000453580 E4F1Q66K89 784 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms