RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RBAKQ9NYW8 714 aaPredicted RBP8.7□□□□□ -1.02
LSM5-208ENST00000450169 SLC9A2Q9UBY0 812 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 EGFL7Q9UHF1 273 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 KCNU1A8MYU2 1149 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 EI24O14681 340 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 HAT1O14929 419 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 MTSS1O43312 755 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 APRTP07741 180 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 JUNDP17535 347 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 POLR2CP19387 275 aaPredicted RBP8.7□□□□□ -1.02
LSM5-208ENST00000450169 MMP8P22894 467 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 GSTM2P28161 218 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 GNA15P30679 374 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 SREBF1P36956 1147 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 SERPINB10P48595 397 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 LAMC2Q13753 1193 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 TAF5Q15542 800 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 QRICH1Q2TAL8 776 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 GPATCH4Q5T3I0 446 aaKnown RBP8.7□□□□□ -1.02
LSM5-208ENST00000450169 TUBA3EQ6PEY2 450 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 OTOP3Q7RTS5 596 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 ZNF598Q86UK7 904 aaKnown RBP8.7□□□□□ -1.02
LSM5-208ENST00000450169 RFX6Q8HWS3 928 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 THNSL1Q8IYQ7 743 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 TNS4Q8IZW8 715 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 PIK3C3Q8NEB9 887 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 OR6Q1Q8NGQ2 317 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 PSMA8Q8TAA3 256 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 GRPEL2Q8TAA5 225 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 SLC10A4Q96EP9 437 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 MAP6Q96JE9 813 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 BTN2A3PQ96KV6 586 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 DEPDC7Q96QD5 511 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 C2orf49Q9BVC5 232 aaPredicted RBP8.7□□□□□ -1.02
LSM5-208ENST00000450169 CHID1Q9BWS9 393 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 SPC25Q9HBM1 224 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 WDR6Q9NNW5 1121 aaKnown RBP8.7□□□□□ -1.02
LSM5-208ENST00000450169 XPNPEP3Q9NQH7 507 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 AGPAT4Q9NRZ5 378 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 WRAP73Q9P2S5 460 aaPredicted RBP8.7□□□□□ -1.02
LSM5-208ENST00000450169 OAZ3Q9UMX2 235 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 AURKCQ9UQB9 309 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 CAB39Q9Y376 341 aaPredicted RBP8.7□□□□□ -1.02
LSM5-208ENST00000450169 COPG1Q9Y678 874 aaKnown RBP8.7□□□□□ -1.02
LSM5-208ENST00000450169 BTAF1O14981 1849 aa8.7□□□□□ -1.02
LSM5-208ENST00000450169 DAB1O75553 588 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 NAGAP17050 411 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 TFE3P19532 575 aaPredicted RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 MPSTP25325 297 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 HTR1BP28222 390 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 ELK4P28324 431 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 PKLRP30613 574 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 ZNF76P36508 570 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 ARCN1P48444 511 aaKnown RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 ALDH7A1P49419 539 aaKnown RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 CLCNKBP51801 687 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 MCCD1P59942 119 aaPredicted RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 PPP4CP60510 307 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 FCHO2Q0JRZ9 810 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 GALNT1Q10472 559 aaPredicted RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 POU6F1Q14863 301 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 POLD3Q15054 466 aaPredicted RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 CTF1Q16619 201 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 HIST2H2ACQ16777 129 aaPredicted RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 AOC3Q16853 763 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 PPM1JQ5JR12 505 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 PRR23BQ6ZRT6 265 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 USP51Q70EK9 711 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 OTOP1Q7RTM1 612 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 LYSMD2Q8IV50 215 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 NIPA2Q8N8Q9 360 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 PEX13Q92968 403 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 EBNA1BP2Q99848 306 aaKnown RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 TMEM246Q9BRR3 403 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 SOX17Q9H6I2 414 aaPredicted RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 C8orf4Q9NR00 106 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 ABCB10Q9NRK6 738 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 CCM2LQ9NUG4 571 aaPredicted RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 DDX28Q9NUL7 540 aaKnown RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 HOXC10Q9NYD6 342 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 PAK5Q9P286 719 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 UBA2Q9UBT2 640 aaPredicted RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 CDYLQ9Y232 598 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 THSD7AQ9UPZ6 1657 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 GOLGB1Q14789 3259 aaKnown RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 SNTNA6NMZ2 147 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 KPNA7A9QM74 516 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 ZW10O43264 779 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 TPST1O60507 370 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 XYLBO75191 536 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 GPC4O75487 556 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 UPK1BO75841 260 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 ALDH1A2O94788 518 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 NTSR2O95665 410 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 CHRNGP07510 517 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 CYP3A4P08684 503 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 KRT7P08729 469 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 HSPA1AP0DMV8 641 aaKnown RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 HSPA1BP0DMV9 641 aaKnown RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 MAPTP10636 758 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms