RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 DIMT1Q9UNQ2 313 aaKnown RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 PLA2G4CQ9UP65 541 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 EIF3LQ9Y262 564 aaKnown RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 RIPK3Q9Y572 518 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 IPPQ9Y573 584 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 PCDHA5Q9Y5H7 936 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 CPQQ9Y646 472 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 MAD1L1Q9Y6D9 718 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ARHGAP5Q13017 1502 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 SF3B1O75533 1304 aaKnown RBP eCLIP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 STK36Q9NRP7 1315 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ADAMTSL3P82987 1691 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 PLCH1Q4KWH8 1693 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ADAMTS12P58397 1594 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 PCM1Q15154 2024 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TAF1LQ8IZX4 1826 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 A0A1B0GWJ7 208 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TCRBV5S2A0A599 114 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZSCAN5CA6NGD5 496 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 CAPN8A6NHC0 703 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 CCDC154A6NI56 674 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 GOLGA8JA6NMD2 632 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 EVPLLA8MZ36 301 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 F5H423 210 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 H0Y858 1186 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 H7C0C1 242 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 CCDC188H7C350 402 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 INO80B-WBP1J3KQ70 363 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 LAD1O00515 517 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF263O14978 683 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 MAPK13O15264 365 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 RAD51CO43502 376 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TOM1O60784 492 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 DKC1O60832 514 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 DTNBO60941 627 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 CDH16O75309 829 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 CLN5O75503 358 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 USP1O94782 785 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 BMP10O95393 424 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZBTB11O95625 1053 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 GAS8O95995 478 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 PRLP01236 227 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 PFKMP08237 780 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 GLI4P10075 376 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF3P17036 446 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TAC1P20366 129 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ITGAXP20702 1163 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 HTR1BP28222 390 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 RRM2P31350 389 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 PTGS2P35354 604 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 CYLC1P35663 651 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 PAFAH1B1P43034 410 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 SYKP43405 635 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 RCAN1P53805 252 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 CACNB3P54284 484 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 BCAR1P56945 870 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 C21orf59P57076 290 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 STX1BP61266 288 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TNNC1P63316 161 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 MYBPC1Q00872 1141 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TFAP4Q01664 338 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 PTH1RQ03431 593 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 GFPT1Q06210 699 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 LRRC74AQ0VAA2 488 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 DLG1Q12959 904 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 IFIT5Q13325 482 aaKnown RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 KRT32Q14532 448 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 KRT81Q14533 505 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 C16orf72Q14CZ0 275 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 SNX17Q15036 470 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 CCDC6Q16204 474 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC15A2Q16348 729 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 CYP2A13Q16696 494 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ASTE1Q2TB18 679 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 LRIT3Q3SXY7 679 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 TBRG1Q3YBR2 411 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 C5orf22Q49AR2 442 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 EARS2Q5JPH6 523 aaKnown RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 HYIQ5T013 277 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 GRTP1Q5TC63 336 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 VWA5B1Q5TIE3 1220 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 KLHDC7AQ5VTJ3 777 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 OGFOD2Q6N063 350 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 SWSAP1Q6NVH7 229 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 GALNT18Q6P9A2 607 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF449Q6P9G9 518 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 MACC1Q6ZN28 852 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 RAPH1Q70E73 1250 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 RALYLQ86SE5 291 aaKnown RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 VSIG10LQ86VR7 867 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 MB21D2Q8IYB1 491 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 RASGEF1CQ8N431 466 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 FAM109AQ8N4B1 249 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 NKAPQ8N5F7 415 aaKnown RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 MARCH10Q8NA82 808 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 PDPRQ8NCN5 879 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 SPATA18Q8TC71 538 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 ACTRT1Q8TDG2 376 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 SSH3Q8TE77 659 aa3.68□□□□□ -1.82
HMGB3P8-201ENST00000449709 SETD7Q8WTS6 366 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms