RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 TAMM41Q96BW9 452 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 PLEKHA8Q96JA3 519 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 ZNF670Q9BS34 389 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 SMARCAD1Q9H4L7 1026 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 VPS51Q9UID3 782 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 FBXO5Q9UKT4 447 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 TRAF6Q9Y4K3 522 aa12.51□□□□□ -0.41
UBE3B-204ENST00000449510 K7EPI3 171 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 DHRS4L1P0CG22 281 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 ATXN8OSP0DMR3 200 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 DBTP11182 482 aaKnown RBP12.5□□□□□ -0.41
UBE3B-204ENST00000449510 TRAF7Q6Q0C0 670 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 CRTC3Q6UUV7 619 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 SFRP1Q8N474 314 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 SMYD1Q8NB12 490 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 OR7A2PQ8NGA2 310 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 SLC45A3Q96JT2 553 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 RBBP8Q99708 897 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 BDH2Q9BUT1 245 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 ULBP1Q9BZM6 244 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 SENP6Q9GZR1 1112 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-204ENST00000449510 TKTL2Q9H0I9 626 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 OR12D3Q9UGF7 316 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 ANAPC2Q9UJX6 822 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 RNF112Q9ULX5 631 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 NOD1Q9Y239 953 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 SNX8Q9Y5X2 465 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 SPATA31A6Q5VVP1 1343 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 A8MU76 341 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 NOBOXO60393 691 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 SYNCRIPO60506 623 aaKnown RBP12.5□□□□□ -0.41
UBE3B-204ENST00000449510 NDUFS3O75489 264 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 GUCA1CO95843 209 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 S100A5P33763 92 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 PWP1Q13610 501 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 SIM2Q14190 667 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-204ENST00000449510 TTLL4Q14679 1199 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 NR6A1Q15406 480 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 AASDHQ4L235 1098 aaPredicted RBP12.5□□□□□ -0.41
UBE3B-204ENST00000449510 SLCO6A1Q86UG4 719 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 P3H2Q8IVL5 708 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 OLIG1Q8TAK6 271 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 STN1Q9H668 368 aaKnown RBP12.5□□□□□ -0.41
UBE3B-204ENST00000449510 ARHGEF4Q9NR80 690 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 FETUBQ9UGM5 382 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 BCLAF3A2AJT9 711 aaKnown RBP12.5□□□□□ -0.41
UBE3B-204ENST00000449510 E7ESA3 106 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 VILLO15195 856 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 B4GAT1O43505 415 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 CILPO75339 1184 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 JUNP05412 331 aaKnown RBP12.5□□□□□ -0.41
UBE3B-204ENST00000449510 CD1EP15812 388 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 PRKCHP24723 683 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 PIK3CGP48736 1102 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 LIMK2P53671 638 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 RAB10P61026 200 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 POU4F1Q01851 419 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 CXCL9Q07325 125 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 BST2Q10589 180 aaKnown RBP12.5□□□□□ -0.41
UBE3B-204ENST00000449510 REP15Q6BDI9 236 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 KBTBD6Q86V97 674 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 METTL25Q8N6Q8 603 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 RORBQ92753 470 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 VPS45Q9NRW7 570 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 STK32BQ9NY57 414 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 MORF4L1Q9UBU8 362 aa12.5□□□□□ -0.41
UBE3B-204ENST00000449510 RSL1D1O76021 490 aaKnown RBP12.49□□□□□ -0.41
UBE3B-204ENST00000449510 SIX3O95343 332 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-204ENST00000449510 ATP5BP06576 529 aaKnown RBP12.49□□□□□ -0.41
UBE3B-204ENST00000449510 CCDC159P0C7I6 412 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 RXRGP48443 463 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 INPP1P49441 399 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 PITX1P78337 314 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-204ENST00000449510 TCEAL1Q15170 157 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 NOMO2Q5JPE7 1267 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 PAGE2Q7Z2X7 111 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 ZC3H7AQ8IWR0 971 aaKnown RBP12.49□□□□□ -0.41
UBE3B-204ENST00000449510 CENPSQ8N2Z9 138 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 ITFG1Q8TB96 612 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 GAB3Q8WWW8 586 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 GJD4Q96KN9 370 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-204ENST00000449510 PPP1R10Q96QC0 940 aaKnown RBP12.49□□□□□ -0.41
UBE3B-204ENST00000449510 RASSF1Q9NS23 344 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 RGS18Q9NS28 235 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 HACL1Q9UJ83 578 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 PLIN4Q96Q06 1357 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 ATP5F1P24539 256 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-204ENST00000449510 NKX2-5P52952 324 aaPredicted RBP12.49□□□□□ -0.41
UBE3B-204ENST00000449510 CCDC142Q17RM4 750 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 SOWAHAQ2M3V2 549 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 METTL21CQ5VZV1 264 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 EPGNQ6UW88 154 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 SLC7A5P1Q8MH63 180 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 HEXDCQ8WVB3 486 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 KLHL32Q96NJ5 620 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 MINDY3Q9H8M7 445 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 CYP3A43Q9HB55 503 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 AMBNQ9NP70 447 aa12.49□□□□□ -0.41
UBE3B-204ENST00000449510 CNOT6Q9ULM6 557 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms