RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 CERS2Q96G23 380 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 ZNF419Q96HQ0 510 aaPredicted RBP9.78□□□□□ -0.84
RFC4-210ENST00000449502 ZFYVE19Q96K21 471 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 LRRC3BQ96PB8 259 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 RANBP9Q96S59 729 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 MYADMQ96S97 322 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 TRMT61BQ9BVS5 477 aaKnown RBP9.78□□□□□ -0.84
RFC4-210ENST00000449502 KIFC1Q9BW19 673 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 ATP13A3Q9H7F0 1226 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 ECT2Q9H8V3 914 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 ARNT2Q9HBZ2 717 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 NSMCE4AQ9NXX6 385 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 SENP1Q9P0U3 644 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 ZFATQ9P243 1243 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 LHX3Q9UBR4 397 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 CDH22Q9UJ99 828 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 PLA2G4CQ9UP65 541 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 CHKBQ9Y259 395 aa9.78□□□□□ -0.84
RFC4-210ENST00000449502 CCDC78A2IDD5 438 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 C2orf81A6NN90 581 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 K7ERQ8 282 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 RRP9O43818 475 aaKnown RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 TBX10O75333 385 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 ECI2O75521 394 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 GJB3O75712 270 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 KRT38O76015 456 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 ALDH1A2O94788 518 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 POP4O95707 220 aaKnown RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 GSRP00390 522 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 MT-ND3P03897 115 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 SRCP12931 536 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 CR2P20023 1033 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 SERPINA4P29622 427 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 GDI1P31150 447 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 CTSOP43234 321 aaPredicted RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 CHRNA4P43681 627 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 RGRP47804 291 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 CSNK1DP48730 415 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 FRG1Q14331 258 aaKnown RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 GRM2Q14416 872 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 GALNT3Q14435 633 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 GRM3Q14832 879 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 RASA2Q15283 850 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 E2F5Q15329 346 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 DLG2Q15700 870 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 SEPT7Q16181 437 aaKnown RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 CTC1Q2NKJ3 1217 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 CARD16Q5EG05 197 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 DENND5AQ6IQ26 1287 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 C22orf39Q6P5X5 142 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 VITQ6UXI7 678 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 TMEM135Q86UB9 458 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 KCNMB4Q86W47 210 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 SH2D3CQ8N5H7 860 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 ST13P5Q8NFI4 369 aaPredicted RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 OR2AP1Q8NGE2 309 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 SLC44A1Q8WWI5 657 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 ISG20Q96AZ6 181 aaKnown RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 MYO19Q96H55 970 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 LMLNQ96KR4 655 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 RPL10LQ96L21 214 aaKnown RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 FAM161BQ96MY7 647 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 TUBGCP5Q96RT8 1024 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 SRPK1Q96SB4 655 aaKnown RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 SMC6Q96SB8 1091 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 KXD1Q9BQD3 176 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 TDRD1Q9BXT4 1180 aaKnown RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 TNKS2Q9H2K2 1166 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 TTYH1Q9H313 450 aaPredicted RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 POMKQ9H5K3 350 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 BRD9Q9H8M2 597 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 CNOT10Q9H9A5 744 aaKnown RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 KCNK9Q9NPC2 374 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 CHRAC1Q9NRG0 131 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.77□□□□□ -0.85
RFC4-210ENST00000449502 HECAQ9UBI9 543 aaPredicted RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 CTNNAL1Q9UBT7 734 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 LGALS13Q9UHV8 139 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 EVLQ9UI08 416 aaPredicted RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 INTS6Q9UL03 887 aaKnown RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 ERVW-1Q9UQF0 538 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 COLQQ9Y215 455 aaPredicted RBP9.77□□□□□ -0.85
RFC4-210ENST00000449502 HS3ST2Q9Y278 367 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 PCDHGC4Q9Y5F7 938 aa9.77□□□□□ -0.85
RFC4-210ENST00000449502 A0A1W2PQ67 120 aa9.76□□□□□ -0.85
RFC4-210ENST00000449502 TBC1D3BA6NDS4 549 aa9.76□□□□□ -0.85
RFC4-210ENST00000449502 FAM159BA6NKW6 160 aa9.76□□□□□ -0.85
RFC4-210ENST00000449502 A6NNZ2 444 aa9.76□□□□□ -0.85
RFC4-210ENST00000449502 SMAD6O43541 496 aaKnown RBP9.76□□□□□ -0.85
RFC4-210ENST00000449502 SOCS5O75159 536 aa9.76□□□□□ -0.85
RFC4-210ENST00000449502 TULP3O75386 442 aa9.76□□□□□ -0.85
RFC4-210ENST00000449502 PAPSS2O95340 614 aaPredicted RBP9.76□□□□□ -0.85
RFC4-210ENST00000449502 CD160O95971 181 aa9.76□□□□□ -0.85
RFC4-210ENST00000449502 SRPRAP08240 638 aaKnown RBP9.76□□□□□ -0.85
RFC4-210ENST00000449502 SNRPAP09012 282 aaKnown RBP9.76□□□□□ -0.85
RFC4-210ENST00000449502 DLDP09622 509 aaKnown RBP9.76□□□□□ -0.85
RFC4-210ENST00000449502 ATXN1LP0C7T5 689 aaKnown RBP9.76□□□□□ -0.85
RFC4-210ENST00000449502 ERVK-10P10266 1014 aa9.76□□□□□ -0.85
RFC4-210ENST00000449502 POU3F3P20264 500 aaPredicted RBP9.76□□□□□ -0.85
RFC4-210ENST00000449502 FCARP24071 287 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms