RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 CCR10P46092 362 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 NR1H2P55055 460 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 TAS2R39P59534 338 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 PPP2R5DQ14738 602 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 SLC5A9Q2M3M2 681 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 FAM45BPQ6NSW5 357 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 ESRP1Q6NXG1 681 aaKnown RBP17.03■□□□□ 0.32
SNHG17-207ENST00000449469 PLEKHH3Q7Z736 793 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 DENND6AQ8IWF6 608 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 ARHGAP12Q8IWW6 846 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 LILRA2Q8N149 483 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 FAM45AQ8TCE6 357 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 DQX1Q8TE96 717 aaKnown RBP17.03■□□□□ 0.32
SNHG17-207ENST00000449469 USP13Q92995 863 aaPredicted RBP17.03■□□□□ 0.32
SNHG17-207ENST00000449469 TMA16Q96EY4 203 aaKnown RBP17.03■□□□□ 0.32
SNHG17-207ENST00000449469 CELF6Q96J87 481 aaKnown RBP17.03■□□□□ 0.32
SNHG17-207ENST00000449469 PKP2Q99959 881 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 HAUS8Q9BT25 410 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 SLC25A23Q9BV35 468 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 SLC2A11Q9BYW1 496 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 SUDS3Q9H7L9 328 aaPredicted RBP17.03■□□□□ 0.32
SNHG17-207ENST00000449469 SPAG4Q9NPE6 437 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 GTSE1Q9NYZ3 720 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 UBAP1Q9NZ09 502 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 TMCO1Q9UM00 188 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 G3BP2Q9UN86 482 aaKnown RBP17.03■□□□□ 0.32
SNHG17-207ENST00000449469 PCDHGA7Q9Y5G6 932 aa17.03■□□□□ 0.32
SNHG17-207ENST00000449469 SHROOM3Q8TF72 1996 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 HEATR9A2RTY3 570 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 MAFKO60675 156 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 PAPSS2O95340 614 aaPredicted RBP17.02■□□□□ 0.32
SNHG17-207ENST00000449469 STAMBPO95630 424 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 THP07101 528 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 F7P08709 466 aaPredicted RBP17.02■□□□□ 0.32
SNHG17-207ENST00000449469 RHDQ02161 417 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 SULT2A1Q06520 285 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 CTBP1Q13363 440 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 EIF4EBP2Q13542 120 aaPredicted RBP17.02■□□□□ 0.32
SNHG17-207ENST00000449469 MANEALQ5VSG8 457 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 ZNF470Q6ECI4 717 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 RWDD4Q6NW29 188 aaKnown RBP17.02■□□□□ 0.32
SNHG17-207ENST00000449469 ANKRD23Q86SG2 305 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 SPPL2BQ8TCT7 592 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 HEXDCQ8WVB3 486 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 FATE1Q969F0 183 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 OSBPL11Q9BXB4 747 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 ARNT2Q9HBZ2 717 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 TRPC7Q9HCX4 862 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 IGSF5Q9NSI5 407 aa17.02■□□□□ 0.32
SNHG17-207ENST00000449469 UBDO15205 165 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 IRAK2O43187 625 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 MYCNP04198 464 aaPredicted RBP17.02■□□□□ 0.31
SNHG17-207ENST00000449469 JUNP05412 331 aaKnown RBP17.02■□□□□ 0.31
SNHG17-207ENST00000449469 LTA4HP09960 611 aaKnown RBP17.02■□□□□ 0.31
SNHG17-207ENST00000449469 PSMC3P17980 439 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 ACADVLP49748 655 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 CPT1AP50416 773 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 NRG1Q02297 640 aaPredicted RBP17.02■□□□□ 0.31
SNHG17-207ENST00000449469 ACAP2Q15057 778 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 SAMD4BQ5PRF9 694 aaKnown RBP17.02■□□□□ 0.31
SNHG17-207ENST00000449469 NEPROQ6NW34 567 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 ARHGAP22Q7Z5H3 698 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 MFSD6LQ8IWD5 586 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 SPATA22Q8NHS9 363 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 EDEM1Q92611 657 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 KLHL32Q96NJ5 620 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 UHRF1Q96T88 793 aaPredicted RBP17.02■□□□□ 0.31
SNHG17-207ENST00000449469 CACNA2D2Q9NY47 1150 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 ADA2Q9NZK5 511 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 AP4S1Q9Y587 144 aa17.02■□□□□ 0.31
SNHG17-207ENST00000449469 C17orf102A2RUQ5 167 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 PSMD12O00232 456 aaPredicted RBP17.01■□□□□ 0.31
SNHG17-207ENST00000449469 TNPO2O14787 897 aaKnown RBP17.01■□□□□ 0.31
SNHG17-207ENST00000449469 TRIM24O15164 1050 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 PGM3O95394 542 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 ODC1P11926 461 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 LEPRP48357 1165 aaKnown RBP17.01■□□□□ 0.31
SNHG17-207ENST00000449469 TXNL4AP83876 142 aaKnown RBP17.01■□□□□ 0.31
SNHG17-207ENST00000449469 LRP8Q14114 963 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 FASTKQ14296 549 aaKnown RBP17.01■□□□□ 0.31
SNHG17-207ENST00000449469 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNHG17-207ENST00000449469 TAF2Q6P1X5 1199 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 RANBP10Q6VN20 620 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 USP33Q8TEY7 942 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 PBXIP1Q96AQ6 731 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 EME1Q96AY2 570 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 HIC2Q96JB3 615 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 ZNF597Q96LX8 424 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 CNBD2Q96M20 576 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 NPAS2Q99743 824 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 ACBD6Q9BR61 282 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 RBM38Q9H0Z9 239 aaKnown RBP17.01■□□□□ 0.31
SNHG17-207ENST00000449469 ATXN10Q9UBB4 475 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 IPO11Q9UI26 975 aaKnown RBP17.01■□□□□ 0.31
SNHG17-207ENST00000449469 PACSIN3Q9UKS6 424 aa17.01■□□□□ 0.31
SNHG17-207ENST00000449469 BBIP1A8MTZ0 92 aa17■□□□□ 0.31
SNHG17-207ENST00000449469 TREHO43280 583 aa17■□□□□ 0.31
SNHG17-207ENST00000449469 TMCC1O94876 653 aa17■□□□□ 0.31
SNHG17-207ENST00000449469 MT-CYBP00156 380 aaPredicted RBP17■□□□□ 0.31
SNHG17-207ENST00000449469 SNRPB2P08579 225 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms