RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 SEMA3CQ99985 751 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 TCF25Q9BQ70 676 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 MGME1Q9BQP7 344 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 SPON2Q9BUD6 331 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 ACE2Q9BYF1 805 aaPredicted RBP10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 SLC13A1Q9BZW2 595 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 MUC3BQ9H195 1237 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 MANSC1Q9H8J5 431 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 ASAH2Q9NR71 780 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 PCMTD2Q9NV79 361 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 SLC17A7Q9P2U7 560 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 PHTF1Q9UMS5 762 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 ARL2BPQ9Y2Y0 163 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 CPQQ9Y646 472 aa10.69□□□□□ -0.7
VIPAS39-203ENST00000448935 KIAA0100Q14667 2235 aaKnown RBP10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 LOC285095A0A1B0GVY8 99 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 HMX2A2RU54 273 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 H0Y626 953 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 BIRC5O15392 142 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 SIN3BO75182 1162 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 CKMP06732 381 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 MMP2P08253 660 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 DDX6P26196 483 aaKnown RBP eCLIP10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 IFT88Q13099 833 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 SEPT6Q14141 434 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 ZKSCAN8Q15776 578 aaPredicted RBP10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 PPM1LQ5SGD2 360 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 ATG16L1Q676U5 607 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 KIAA0408Q6ZU52 694 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 SRLQ86TD4 932 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 FAM217AQ8IXS0 508 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 PGBD5Q8N414 524 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 CPXM2Q8N436 756 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 MRPL43Q8N983 215 aaKnown RBP10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 OR7D4Q8NG98 312 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 THAP11Q96EK4 314 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 TMA16Q96EY4 203 aaKnown RBP10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 IARS2Q9NSE4 1012 aaKnown RBP10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 TREX1Q9NSU2 369 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 SMPD4Q9NXE4 827 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 KLHL14Q9P2G3 628 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 RRP15Q9Y3B9 282 aaKnown RBP10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 SH3BP1Q9Y3L3 701 aa10.68□□□□□ -0.7
VIPAS39-203ENST00000448935 ALPK3Q96L96 1907 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 A0A0D9SEW6 157 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 SOBPA7XYQ1 873 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 TPP1O14773 563 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 TSPAN3O60637 253 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 TBL1XO60907 577 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 LUC7L3O95232 432 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 IL1BP01584 269 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 ALDOAP04075 364 aaKnown RBP10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 CCNYL3P0C7X3 344 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 SPATA31D3P0C874 917 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 TROVE2P10155 538 aaKnown RBP eCLIP10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 DNAJB1P25685 340 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 MAGEA12P43365 314 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 CDK18Q07002 472 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 CCDC153Q494R4 210 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 INO80DQ53TQ3 878 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 RALGPS1Q5JS13 557 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 MPP7Q5T2T1 576 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 TSTD2Q5T7W7 516 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 RNF187Q5TA31 235 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 RNF219Q5W0B1 726 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 TXNDC8Q6A555 127 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 ELMSAN1Q6PJG2 1045 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 Q6ZNB5 142 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 SPATA31D4Q6ZUB0 917 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 HTR3DQ70Z44 454 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 TMC8Q8IU68 726 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 SLC25A41Q8N5S1 370 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 GBP7Q8N8V2 638 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 LEMD2Q8NC56 503 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 ZNF398Q8TD17 642 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 PTPRN2Q92932 1015 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 OCSTAMPQ9BR26 566 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 LRRC3Q9BY71 257 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 ATXN3LQ9H3M9 355 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 RHOJQ9H4E5 214 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 TLR9Q9NR96 1032 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 CXXC1Q9P0U4 656 aaPredicted RBP10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 DPP7Q9UHL4 492 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 MID2Q9UJV3 735 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 RIMKLBQ9ULI2 386 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 PSAT1Q9Y617 370 aa10.67□□□□□ -0.7
VIPAS39-203ENST00000448935 HELZP42694 1942 aaKnown RBP10.66□□□□□ -0.7
VIPAS39-203ENST00000448935 MYLKQ15746 1914 aa10.66□□□□□ -0.7
VIPAS39-203ENST00000448935 WDR91A4D1P6 747 aa10.66□□□□□ -0.7
VIPAS39-203ENST00000448935 CBX4O00257 560 aa10.66□□□□□ -0.7
VIPAS39-203ENST00000448935 VAPBO95292 243 aa10.66□□□□□ -0.7
VIPAS39-203ENST00000448935 RB1P06400 928 aa10.66□□□□□ -0.7
VIPAS39-203ENST00000448935 EN2P19622 333 aaPredicted RBP10.66□□□□□ -0.7
VIPAS39-203ENST00000448935 ALDH3A1P30838 453 aa10.66□□□□□ -0.7
VIPAS39-203ENST00000448935 HOXA9P31269 272 aa10.66□□□□□ -0.7
VIPAS39-203ENST00000448935 CHRNA4P43681 627 aa10.66□□□□□ -0.7
VIPAS39-203ENST00000448935 CDH18Q13634 790 aa10.66□□□□□ -0.7
VIPAS39-203ENST00000448935 MPPE1Q53F39 396 aa10.66□□□□□ -0.7
VIPAS39-203ENST00000448935 ARHGAP15Q53QZ3 475 aa10.66□□□□□ -0.7
VIPAS39-203ENST00000448935 TAF1BQ53T94 588 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms