RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 SERPING1P05155 500 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 JUPP14923 745 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 ERCC2P18074 760 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 SUOXP51687 545 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 HNRNPKP61978 463 aaKnown RBP eCLIP19.93■□□□□ 0.78
VCP-203ENST00000448530 ACAP1Q15027 740 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 LRRC73Q5JTD7 316 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 PROSER1Q86XN7 944 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 MARCH9Q86YJ5 346 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 SLC22A18ASQ8N1D0 253 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 SLC25A45Q8N413 288 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 PAF1Q8N7H5 531 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 PDCD7Q8N8D1 485 aaKnown RBP19.93■□□□□ 0.78
VCP-203ENST00000448530 OR4C6Q8NH72 309 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 SLC39A8Q9C0K1 460 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 ZWILCHQ9H900 591 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 SP110Q9HB58 689 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 PDFQ9HBH1 243 aa19.93■□□□□ 0.78
VCP-203ENST00000448530 TRABD2BA6NFA1 517 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 H3BRJ5 948 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 DFFAO00273 331 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 TRIM38O00635 465 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 PALMO75781 387 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 TM7SF2O76062 418 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 PCK1P35558 622 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 HCAR3P49019 387 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 THOP1P52888 689 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 ZBED6P86452 979 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 ELP6Q0PNE2 266 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 PDE1CQ14123 709 aaPredicted RBP19.92■□□□□ 0.78
VCP-203ENST00000448530 NFKBIBQ15653 356 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 ZNF542PQ5EBM4 170 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 PARGQ86W56 976 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 HCAR2Q8TDS4 363 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 KLF6Q99612 283 aaPredicted RBP19.92■□□□□ 0.78
VCP-203ENST00000448530 EVA1BQ9NVM1 165 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 UCKL1Q9NWZ5 548 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 LUC7L2Q9Y383 392 aaKnown RBP19.92■□□□□ 0.78
VCP-203ENST00000448530 ANKRD11Q6UB99 2663 aaPredicted RBP19.92■□□□□ 0.78
VCP-203ENST00000448530 CHD6Q8TD26 2715 aa19.92■□□□□ 0.78
VCP-203ENST00000448530 ASPMQ8IZT6 3477 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 SPTY2D1-AS1A0A0U1RR47 76 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 INSIG1O15503 277 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 SPINT1O43278 529 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 MMP20O60882 483 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 PIGNO95427 931 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 TPM3P06753 285 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 TIMP2P16035 220 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 PBX1P40424 430 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 ARL4AP40617 200 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 FZD2Q14332 565 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 PIGHQ14442 188 aaPredicted RBP19.91■□□□□ 0.78
VCP-203ENST00000448530 PROX2Q3B8N5 592 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 BOLA3Q53S33 107 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 HGSNATQ68CP4 663 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 ERAP2Q6P179 960 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 LZTR1Q8N653 840 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 MDM1Q8TC05 714 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 VOPP1Q96AW1 172 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 ZNF641Q96N77 438 aaPredicted RBP19.91■□□□□ 0.78
VCP-203ENST00000448530 TUBGCP5Q96RT8 1024 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 WRAP53Q9BUR4 548 aaKnown RBP19.91■□□□□ 0.78
VCP-203ENST00000448530 CINPQ9BW66 212 aaPredicted RBP19.91■□□□□ 0.78
VCP-203ENST00000448530 SUV39H2Q9H5I1 410 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 CAPN11Q9UMQ6 739 aa19.91■□□□□ 0.78
VCP-203ENST00000448530 ZZEF1O43149 2961 aa19.9■□□□□ 0.78
VCP-203ENST00000448530 KNTC1P50748 2209 aa19.9■□□□□ 0.78
VCP-203ENST00000448530 CAPNS1P04632 268 aa19.9■□□□□ 0.78
VCP-203ENST00000448530 ACP1P24666 158 aa19.9■□□□□ 0.78
VCP-203ENST00000448530 PTK2BQ14289 1009 aa19.9■□□□□ 0.78
VCP-203ENST00000448530 RFTN1Q14699 578 aaPredicted RBP19.9■□□□□ 0.78
VCP-203ENST00000448530 BRAT1Q6PJG6 821 aa19.9■□□□□ 0.78
VCP-203ENST00000448530 CYP4V2Q6ZWL3 525 aaPredicted RBP19.9■□□□□ 0.78
VCP-203ENST00000448530 HSPH1Q92598 858 aa19.9■□□□□ 0.78
VCP-203ENST00000448530 DUSP23Q9BVJ7 150 aa19.9■□□□□ 0.78
VCP-203ENST00000448530 ATP13A3Q9H7F0 1226 aa19.9■□□□□ 0.78
VCP-203ENST00000448530 GPR27Q9NS67 375 aa19.9■□□□□ 0.78
VCP-203ENST00000448530 NLGN3Q9NZ94 848 aa19.9■□□□□ 0.78
VCP-203ENST00000448530 CWC15Q9P013 229 aaKnown RBP19.9■□□□□ 0.78
VCP-203ENST00000448530 IFNKQ9P0W0 207 aa19.9■□□□□ 0.78
VCP-203ENST00000448530 SCAMP1O15126 338 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 CSF2P04141 144 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 NME1P15531 152 aaKnown RBP19.89■□□□□ 0.77
VCP-203ENST00000448530 SERPINA4P29622 427 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 CSNK1DP48730 415 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 PFN3P60673 137 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 E2F1Q01094 437 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 IL10RBQ08334 325 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 CYP4F3Q08477 520 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 UGP2Q16851 508 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 SMTNL2Q2TAL5 461 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 HES3Q5TGS1 186 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 AFMIDQ63HM1 303 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 SRLQ86TD4 932 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 ARHGAP12Q8IWW6 846 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 DMXL2Q8TDJ6 3036 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 BTN2A2Q8WVV5 523 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 CENPTQ96BT3 561 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 THAP2Q9H0W7 228 aa19.89■□□□□ 0.77
VCP-203ENST00000448530 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms