RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 LMO7DNF2Z398 122 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 H3BS24 57 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 KRT86O43790 486 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 GCATO75600 419 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 PIGRP01833 764 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 GLI1P08151 1106 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 FGF3P11487 239 aaPredicted RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 TCN2P20062 427 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 KLK2P20151 261 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 MUTP22033 750 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 ATP5C1P36542 298 aaKnown RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 GDNFP39905 211 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 SLC5A3P53794 718 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 POU5F1Q01860 360 aaKnown RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 CALCRLQ16602 461 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 FBLN7Q53RD9 439 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 CREB3L3Q68CJ9 461 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 MBLAC2Q68D91 279 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 DPH6Q7L8W6 267 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 PARGQ86W56 976 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 NT5DC4Q86YG4 428 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 DCP2Q8IU60 420 aaKnown RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 LRRC52Q8N7C0 313 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 KDM1BQ8NB78 822 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 ARSGQ96EG1 525 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 C14orf79Q96F83 325 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 KIRREL1Q96J84 757 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 DDA1Q9BW61 102 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 CPEB1Q9BZB8 566 aaKnown RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 ZNF518BQ9C0D4 1074 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 ELOVL4Q9GZR5 314 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 COMMD8Q9NX08 183 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 OSER1Q9NX31 292 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 GGT7Q9UJ14 662 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 CROTQ9UKG9 612 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 SNX9Q9Y5X1 595 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 VWA3AA6NCI4 1184 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 AGRPO00253 132 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 LRRTM2O43300 516 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 SIX3O95343 332 aaPredicted RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 CBX7O95931 251 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 ITGB3P05106 788 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 ATP5BP06576 529 aaKnown RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 COX6B1P14854 86 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 POLR2BP30876 1174 aaKnown RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 MATR3P43243 847 aaKnown RBP eCLIP3.36□□□□□ -1.87
PMS1-215ENST00000447232 PSMD8P48556 350 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 METAP1P53582 386 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 PTK2BQ14289 1009 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 ARHGAP44Q17R89 818 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 ZNF630Q2M218 657 aaPredicted RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 MDH1BQ5I0G3 518 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 AGBL4Q5VU57 503 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 SLC39A4Q6P5W5 647 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 Q6ZSR6 202 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 THAP5Q7Z6K1 395 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 ARL10Q8N8L6 244 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 UBE2FQ969M7 185 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 KIAA1143Q96AT1 154 aaPredicted RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 CENPTQ96BT3 561 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 SNRNP40Q96DI7 357 aaKnown RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 MRGPRX3Q96LB0 322 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 TBATAQ96M53 351 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 KCNK16Q96T55 309 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 CHST11Q9NPF2 352 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 COPG2Q9UBF2 871 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 GGA2Q9UJY4 613 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 AGO1Q9UL18 857 aaKnown RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 AGAP1Q9UPQ3 857 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 PCDHGA9Q9Y5G4 932 aaKnown RBP3.36□□□□□ -1.87
PMS1-215ENST00000447232 B3GALT1Q9Y5Z6 326 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 RNF215Q9Y6U7 377 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 MYH11P35749 1972 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 ABCA4P78363 2273 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 ITIH6Q6UXX5 1313 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 HGSO14964 777 aaPredicted RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 MDM4O15151 490 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 SLC31A1O15431 190 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 DNAJB5O75953 348 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 CYBBP04839 570 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 SNRPB2P08579 225 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 PABPC1P11940 636 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 GSPT1P15170 499 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 PRLRP16471 622 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 PTPN1P18031 435 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 PDCP20941 246 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 HNRNPA2B1P22626 353 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 WARSP23381 471 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 ITGA1P56199 1179 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 CLDN2P57739 230 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 TAS2R38P59533 333 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 ABHD18Q0P651 414 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 HDAC1Q13547 482 aaPredicted RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 GNL2Q13823 731 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 ZNF284Q2VY69 593 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 SLC6A19Q695T7 634 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 ESRP1Q6NXG1 681 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 LINGO4Q6UY18 593 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 PARS2Q7L3T8 475 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms