RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 IFT43Q96FT9 208 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 DMGDHQ9UI17 866 aaKnown RBP17.58■□□□□ 0.41
SGCE-206ENST00000445866 SARDHQ9UL12 918 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 CHKBQ9Y259 395 aa17.58■□□□□ 0.41
SGCE-206ENST00000445866 KIF26AQ9ULI4 1882 aaPredicted RBP17.58■□□□□ 0.41
SGCE-206ENST00000445866 KPNA3O00505 521 aaPredicted RBP17.58■□□□□ 0.4
SGCE-206ENST00000445866 AGTP01019 485 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 DGKEP52429 567 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 SATB1Q01826 763 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 CDK18Q07002 472 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 CFAP58Q5T655 872 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 FAM46CQ5VWP2 391 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 KDELC1Q6UW63 502 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 PCGF5Q86SE9 256 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 PBXIP1Q96AQ6 731 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 SNF8Q96H20 258 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 KLHL32Q96NJ5 620 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 OSBPL1AQ9BXW6 950 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 RSPH9Q9H1X1 276 aaPredicted RBP17.58■□□□□ 0.4
SGCE-206ENST00000445866 EPB41L5Q9HCM4 733 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 POLMQ9NP87 494 aaPredicted RBP17.58■□□□□ 0.4
SGCE-206ENST00000445866 C2orf42Q9NWW7 574 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 ANAPC5Q9UJX4 755 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 PCDHB9Q9Y5E1 797 aa17.58■□□□□ 0.4
SGCE-206ENST00000445866 TRAFD1O14545 582 aaPredicted RBP17.57■□□□□ 0.4
SGCE-206ENST00000445866 AP2A1O95782 977 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 ITIH2P19823 946 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 CA4P22748 312 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 SLC8A1P32418 973 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 RPL21P46778 160 aaKnown RBP17.57■□□□□ 0.4
SGCE-206ENST00000445866 CLCN5P51795 746 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 TRAF2Q12933 501 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 MTAPQ13126 283 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 ARMC12Q5T9G4 340 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 IZUMO3Q5VZ72 239 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 CWF19L1Q69YN2 538 aaKnown RBP17.57■□□□□ 0.4
SGCE-206ENST00000445866 CPT1BQ92523 772 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 VOPP1Q96AW1 172 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 MRGPRX2Q96LB1 330 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 FSD1LQ9BXM9 530 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 MKRN2Q9H000 416 aaKnown RBP17.57■□□□□ 0.4
SGCE-206ENST00000445866 LRRC40Q9H9A6 602 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 FBRSQ9HAH7 460 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 ARIH1Q9Y4X5 557 aaPredicted RBP17.57■□□□□ 0.4
SGCE-206ENST00000445866 COL4A3Q01955 1670 aa17.57■□□□□ 0.4
SGCE-206ENST00000445866 TCRBV7S3A2A0A539 114 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 TCRBV21S2A2A0A5A6 115 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 ERI2A8K979 691 aaKnown RBP17.56■□□□□ 0.4
SGCE-206ENST00000445866 C1QTNF3-AMACRE9PGA6 284 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 DNALI1O14645 258 aaPredicted RBP17.56■□□□□ 0.4
SGCE-206ENST00000445866 HTRA2O43464 458 aaPredicted RBP17.56■□□□□ 0.4
SGCE-206ENST00000445866 SOCS5O75159 536 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 PDHA1P08559 390 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 AOC1P19801 751 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 PSMD8P48556 350 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 COPAP53621 1224 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 DRG2P55039 364 aaKnown RBP17.56■□□□□ 0.4
SGCE-206ENST00000445866 RPS14P62263 151 aaKnown RBP17.56■□□□□ 0.4
SGCE-206ENST00000445866 TRADDQ15628 312 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 CST6Q15828 149 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 SLC14A2Q15849 920 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 ZNF805Q5CZA5 627 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 ZNF776Q68DI1 518 aaPredicted RBP17.56■□□□□ 0.4
SGCE-206ENST00000445866 KCTD11Q693B1 232 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 PPIL6Q8IXY8 311 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 UBXN4Q92575 508 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 SIPA1Q96FS4 1042 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 APOL2Q9BQE5 337 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 FICDQ9BVA6 458 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 ADGRE3Q9BY15 652 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 SLC6A17Q9H1V8 727 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 CD248Q9HCU0 757 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 DYRK4Q9NR20 520 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 DOCK4Q8N1I0 1966 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 NUP205Q92621 2012 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 TICRRQ7Z2Z1 1910 aa17.56■□□□□ 0.4
SGCE-206ENST00000445866 LOC285095A0A1B0GVY8 99 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 ESYT3A0FGR9 886 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 USP12O75317 370 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 PGLSO95336 258 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 PRLP01236 227 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 EPOP01588 193 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 MAGEA9P43362 315 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 EPHB1P54762 984 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 SARNPP82979 210 aaKnown RBP17.55■□□□□ 0.4
SGCE-206ENST00000445866 CDK16Q00536 496 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 CALCOCO2Q13137 446 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 OLIG2Q13516 323 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 RNASEH2BQ5TBB1 312 aaKnown RBP17.55■□□□□ 0.4
SGCE-206ENST00000445866 ANKRD22Q5VYY1 191 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 TTC7BQ86TV6 843 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 CACUL1Q86Y37 369 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 KLHDC8BQ8IXV7 354 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 PGBD3Q8N328 593 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 SLC25A41Q8N5S1 370 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 BBOF1Q8ND07 529 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 TSTD1Q8NFU3 115 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 HMGB4Q8WW32 186 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 IFT81Q8WYA0 676 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 RMDN1Q96DB5 314 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms