RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 ECT2LQ008S8 904 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 SULT2A1Q06520 285 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 NSUN2Q08J23 767 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 DMC1Q14565 340 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 PDGFRLQ15198 375 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 SLC14A2Q15849 920 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 PCID2Q5JVF3 399 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 SIRPB2Q5JXA9 342 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 SPANXN3Q5MJ09 141 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 ATXN7L2Q5T6C5 722 aaPredicted RBP9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 LRRC6Q86X45 466 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 TDRPQ86YL5 185 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 AHI1Q8N157 1196 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 PPM1NQ8N819 430 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 CDKL2Q92772 493 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 MYADMQ96S97 322 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 ARNT2Q9HBZ2 717 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 SOX13Q9UN79 622 aa9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 COLQQ9Y215 455 aaPredicted RBP9.6□□□□□ -0.87
SMPD4P1-203ENST00000443839 LOC285095A0A1B0GVY8 99 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 TRIM24O15164 1050 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 FGF1P05230 155 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 POLR2EP19388 210 aaKnown RBP9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 NR1D1P20393 614 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 CA4P22748 312 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 GCAP28676 217 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 DGKGP49619 791 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 AP1S1P61966 158 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 ADGRE1Q14246 886 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 GALNT3Q14435 633 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 SMAD1Q15797 465 aaKnown RBP9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 ACCSLQ4AC99 568 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 ANKRD20A4Q4UJ75 823 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 VITQ6UXI7 678 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 TMEM135Q86UB9 458 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 RYBPQ8N488 228 aaPredicted RBP9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 PAF1Q8N7H5 531 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 PDCD6IPQ8WUM4 868 aaKnown RBP9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 PTCD2Q8WV60 388 aaKnown RBP9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 MFSD3Q96ES6 412 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 FAM161BQ96MY7 647 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 KXD1Q9BQD3 176 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 KIFC1Q9BW19 673 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 TDRD1Q9BXT4 1180 aaKnown RBP9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 MOCS1Q9NZB8 636 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 LGALS13Q9UHV8 139 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 CHKBQ9Y259 395 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 HS3ST2Q9Y278 367 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 ARIH1Q9Y4X5 557 aaPredicted RBP9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 PCDHGC4Q9Y5F7 938 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 ANKRD36A6QL64 1941 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 CXorf51AA0A1B0GTR3 108 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 HEATR9A2RTY3 570 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 TULP3O75386 442 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 ALDH1A2O94788 518 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 NDST3O95803 873 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 IGSF6O95976 241 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 ATXN1LP0C7T5 689 aaKnown RBP9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 SRCP12931 536 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 LAMP2P13473 410 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 KRT15P19012 456 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 ADRA1DP25100 572 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 LTBRP36941 435 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 GRM2Q14416 872 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 RALGPS1Q5JS13 557 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 MBLAC2Q68D91 279 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 PKN3Q6P5Z2 889 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 CYS1Q717R9 158 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 TAOK1Q7L7X3 1001 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 SRLQ86TD4 932 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 ADIPOR2Q86V24 386 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 SLC26A11Q86WA9 606 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 MFSD6LQ8IWD5 586 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 UNC5BQ8IZJ1 945 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 OR6K2Q8NGY2 324 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 SLC44A1Q8WWI5 657 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 TTC17Q96AE7 1141 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 TLCD1Q96CP7 247 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 RMDN1Q96DB5 314 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 CERS2Q96G23 380 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 FCRL3Q96P31 734 aaPredicted RBP9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 FAM83CQ9BQN1 747 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 ADGRE3Q9BY15 652 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 CIPCQ9C0C6 399 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 TNKS2Q9H2K2 1166 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 POMKQ9H5K3 350 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 IL1RAPL1Q9NZN1 696 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 ZFATQ9P243 1243 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 TCAF1Q9Y4C2 921 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 RAI2Q9Y5P3 530 aa9.59□□□□□ -0.87
SMPD4P1-203ENST00000443839 ZCWPW2A0A1B0GU75 182 aa9.58□□□□□ -0.88
SMPD4P1-203ENST00000443839 FAM159BA6NKW6 160 aa9.58□□□□□ -0.88
SMPD4P1-203ENST00000443839 CXorf49A8MYA2 514 aaPredicted RBP9.58□□□□□ -0.88
SMPD4P1-203ENST00000443839 BNIP3LO60238 219 aa9.58□□□□□ -0.88
SMPD4P1-203ENST00000443839 ERVK-10P10266 1014 aa9.58□□□□□ -0.88
SMPD4P1-203ENST00000443839 PSMC3P17980 439 aa9.58□□□□□ -0.88
SMPD4P1-203ENST00000443839 NMBRP28336 390 aa9.58□□□□□ -0.88
SMPD4P1-203ENST00000443839 MAPK8P45983 427 aa9.58□□□□□ -0.88
SMPD4P1-203ENST00000443839 MLLT1Q03111 559 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms