RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 MAOBP27338 520 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 SERPINA4P29622 427 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 PTPN7P35236 360 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 CETN2P41208 172 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 RGRP47804 291 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 PEX5P50542 639 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 SCNN1BP51168 640 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 CCDC6Q16204 474 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 ALG1LQ6GMV1 187 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 BRAT1Q6PJG6 821 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 PRPF39Q86UA1 669 aaKnown RBP15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 CCDC50Q8IVM0 306 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 CCDC13Q8IYE1 715 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 UBL4BQ8N7F7 174 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 SNX19Q92543 992 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 SPOCK2Q92563 424 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 ORAI3Q9BRQ5 295 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 CAPN10Q9HC96 672 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 DMTF1Q9Y222 760 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 HEY1Q9Y5J3 304 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 FADS3Q9Y5Q0 445 aa15.21■□□□□ 0.03
CSNK1E-210ENST00000442216 A0A1W2PQ67 120 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 MUSKO15146 869 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 TSPAN6O43657 245 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 CST8O60676 142 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 CCNB1P14635 433 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 SDHBP21912 280 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 LIMK1P53667 647 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 RACK1P63244 317 aaKnown RBP15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 IRX4P78413 519 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 BCL2L1Q07817 233 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 SF3A2Q15428 464 aaKnown RBP15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 AASDHQ4L235 1098 aaPredicted RBP15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 KIAA1161Q6NSJ0 714 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 BBS12Q6ZW61 710 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 HORMAD1Q86X24 394 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 PGBD5Q8N414 524 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 CCNYQ8ND76 341 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 ECHDC3Q96DC8 303 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 FEM1CQ96JP0 617 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 ZDHHC5Q9C0B5 715 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 MIR1-1HGQ9H1L0 117 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 SMOC1Q9H4F8 434 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 GUCA1BQ9UMX6 200 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 CAPN6Q9Y6Q1 641 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 USP34Q70CQ2 3546 aa15.2■□□□□ 0.02
CSNK1E-210ENST00000442216 LNP1A1A4G5 178 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 PATE3B3GLJ2 98 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 AREL1O15033 823 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 RNGTTO60942 597 aaKnown RBP15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 SOCS5O75159 536 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 MAP3K6O95382 1288 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 CFIP05156 583 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 SYPP08247 313 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 KRT10P13645 584 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 GRIA4P48058 902 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 AFF3P51826 1226 aaKnown RBP15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 PPP2CBP62714 309 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 POLR2LP62875 67 aaKnown RBP15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 PPP2CAP67775 309 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 IFI35P80217 286 aaPredicted RBP15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 ELP6Q0PNE2 266 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 TEAD4Q15561 434 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 SETMARQ53H47 684 aaPredicted RBP15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 CFAP58Q5T655 872 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 KAZNQ674X7 775 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 TTC7BQ86TV6 843 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 ZCCHC9Q8N567 271 aaKnown RBP15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 NETO1Q8TDF5 533 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 P3H4Q92791 437 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 HES6Q96HZ4 224 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 PDLIM2Q96JY6 352 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 POLR1EQ9GZS1 481 aaKnown RBP15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 TM9SF3Q9HD45 589 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 NT5MQ9NPB1 228 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 SCUBE2Q9NQ36 999 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 DMDP11532 3685 aa15.19■□□□□ 0.02
CSNK1E-210ENST00000442216 TMEM131Q92545 1883 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 APOC4-APOC2K7ER74 178 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 TRAFD1O14545 582 aaPredicted RBP15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 ARHGAP33O14559 1287 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 HTRA2O43464 458 aaPredicted RBP15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 NEBLO76041 1014 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 PCDH8O95206 1070 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 PIGNO95427 931 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 APOC2P02655 101 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 TIMP2P16035 220 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 ABL2P42684 1182 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 DYNLT1P63172 113 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 RPS21P63220 83 aaKnown RBP15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 UGP2Q16851 508 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 TMEM259Q4ZIN3 620 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 TCEAL6Q6IPX3 200 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 NAPEPLDQ6IQ20 393 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 NPNTQ6UXI9 565 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 CAMK1DQ8IU85 385 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 ASB12Q8WXK4 309 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 ALG3Q92685 438 aa15.18■□□□□ 0.02
CSNK1E-210ENST00000442216 TCEAL3Q969E4 200 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms