RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 SLC13A1Q9BZW2 595 aa7.89□□□□□ -1.15
CD44-211ENST00000442151 MRPL47Q9HD33 250 aaKnown RBP7.89□□□□□ -1.15
CD44-211ENST00000442151 DNAI1Q9UI46 699 aa7.89□□□□□ -1.15
CD44-211ENST00000442151 DOLKQ9UPQ8 538 aa7.89□□□□□ -1.15
CD44-211ENST00000442151 SIK3Q9Y2K2 1263 aa7.89□□□□□ -1.15
CD44-211ENST00000442151 GPSM3Q9Y4H4 160 aa7.89□□□□□ -1.15
CD44-211ENST00000442151 SNX10Q9Y5X0 201 aa7.89□□□□□ -1.15
CD44-211ENST00000442151 SLCO1B1Q9Y6L6 691 aa7.89□□□□□ -1.15
CD44-211ENST00000442151 A0A087WV48 116 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 PDE2AO00408 941 aaPredicted RBP7.88□□□□□ -1.15
CD44-211ENST00000442151 PLK4O00444 970 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 WNT9AO14904 365 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 SIGLEC6O43699 453 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 LRIG2O94898 1065 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 MYBL1P10243 752 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 GZMAP12544 262 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 ATP1A3P13637 1013 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 KRT10P13645 584 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 TFE3P19532 575 aaPredicted RBP7.88□□□□□ -1.15
CD44-211ENST00000442151 HTR1BP28222 390 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 RFC1P35251 1148 aaPredicted RBP7.88□□□□□ -1.15
CD44-211ENST00000442151 ABCG1P45844 678 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 TPI1P60174 286 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 ARF5P84085 180 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 CAMK2BQ13554 666 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 C15orf59Q2T9L4 293 aaPredicted RBP7.88□□□□□ -1.15
CD44-211ENST00000442151 ESRP1Q6NXG1 681 aaKnown RBP7.88□□□□□ -1.15
CD44-211ENST00000442151 LVRNQ6Q4G3 990 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 KANSL1Q7Z3B3 1105 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 PDZD3Q86UT5 571 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 VPS36Q86VN1 386 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 NLRP14Q86W24 1093 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 NDUFAF2Q8N183 169 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 UMODL1-AS1Q8N2C9 162 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 FSTL5Q8N475 847 aaPredicted RBP7.88□□□□□ -1.15
CD44-211ENST00000442151 PAF1Q8N7H5 531 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 LSM14AQ8ND56 463 aaKnown RBP7.88□□□□□ -1.15
CD44-211ENST00000442151 MDM1Q8TC05 714 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 GPT2Q8TD30 523 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 SLC20A1Q8WUM9 679 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 NSMCE1Q8WV22 266 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 KLK6Q92876 244 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 FGF11Q92914 225 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 NAT6Q93015 286 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 IQCDQ96DY2 449 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 ZNF578Q96N58 590 aaPredicted RBP7.88□□□□□ -1.15
CD44-211ENST00000442151 TUBGCP5Q96RT8 1024 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 ANLNQ9NQW6 1124 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 UBA2Q9UBT2 640 aaPredicted RBP7.88□□□□□ -1.15
CD44-211ENST00000442151 FZD10Q9ULW2 581 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 FCF1Q9Y324 198 aaKnown RBP7.88□□□□□ -1.15
CD44-211ENST00000442151 SCINQ9Y6U3 715 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 NUMA1Q14980 2115 aa7.88□□□□□ -1.15
CD44-211ENST00000442151 SPTY2D1-AS1A0A0U1RR47 76 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 IGLON5A6NGN9 336 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 TAF4O00268 1085 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 CREB3O43889 395 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 ANXA6P08133 673 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 ALPIP09923 528 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 CTSEP14091 401 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 PRLRP16471 622 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 JUNDP17535 347 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 KELP23276 732 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 MLLT3P42568 568 aaPredicted RBP7.87□□□□□ -1.15
CD44-211ENST00000442151 CSNK1DP48730 415 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 UCNP55089 124 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 HDAC4P56524 1084 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 DNAJC3Q13217 504 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 NR0B2Q15466 257 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 ASIC2Q16515 512 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 ERMARDQ5T6L9 678 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 FAXCQ5TGI0 409 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 BRAT1Q6PJG6 821 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 SLC25A45Q8N413 288 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 OR13H1Q8NG92 308 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 HNRNPLLQ8WVV9 542 aaKnown RBP7.87□□□□□ -1.15
CD44-211ENST00000442151 BMFQ96LC9 184 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 KLHL32Q96NJ5 620 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 BPIFA3Q9BQP9 254 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 ANP32EQ9BTT0 268 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 KRTAP9-2Q9BYQ4 174 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 TM6SF2Q9BZW4 377 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 ZNF212Q9UDV6 495 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 ZFR2Q9UPR6 939 aaKnown RBP7.87□□□□□ -1.15
CD44-211ENST00000442151 RAXQ9Y2V3 346 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 BZW2Q9Y6E2 419 aaKnown RBP7.87□□□□□ -1.15
CD44-211ENST00000442151 CHD6Q8TD26 2715 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 PLXNA2O75051 1894 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 FAM149AA5PLN7 773 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 RASA4BC9J798 803 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 AQP9O43315 295 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 RASA4O43374 803 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 PRPSAP2O60256 369 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 LZTS3O60299 673 aaPredicted RBP7.87□□□□□ -1.15
CD44-211ENST00000442151 OPA1O60313 960 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 ZNF821O75541 412 aaPredicted RBP7.87□□□□□ -1.15
CD44-211ENST00000442151 UGT2B4P06133 528 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 NME1P15531 152 aaKnown RBP7.87□□□□□ -1.15
CD44-211ENST00000442151 PTMSP20962 102 aa7.87□□□□□ -1.15
CD44-211ENST00000442151 PSMA2P25787 234 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms