RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CEP350Q5VT06 3117 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 SOBPA7XYQ1 873 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 MRASO14807 208 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 TOMM70O94826 608 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 KPNA1P52294 538 aaPredicted RBP20.48■□□□□ 0.87
SHOX2-203ENST00000441443 ZNF362Q5T0B9 420 aaPredicted RBP20.48■□□□□ 0.87
SHOX2-203ENST00000441443 CNSTQ6PJW8 725 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 NT5C1AQ9BXI3 368 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 UPF3AQ9H1J1 476 aaKnown RBP20.48■□□□□ 0.87
SHOX2-203ENST00000441443 PTPRHQ9HD43 1115 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 RNF181Q9P0P0 153 aa20.48■□□□□ 0.87
SHOX2-203ENST00000441443 KLHL8Q9P2G9 620 aaPredicted RBP20.48■□□□□ 0.87
SHOX2-203ENST00000441443 NEMP2A6NFY4 417 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 APOA4P06727 396 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 IREB2P48200 963 aaKnown RBP20.47■□□□□ 0.87
SHOX2-203ENST00000441443 HK2P52789 917 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 RAB15P59190 212 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 MOGQ16653 247 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 SOWAHAQ2M3V2 549 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 ANO4Q32M45 955 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 CAMK1DQ8IU85 385 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 SLC41A1Q8IVJ1 513 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 PELI3Q8N2H9 469 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 STYXQ8WUJ0 223 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 ACDQ96AP0 544 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 EGFL7Q9UHF1 273 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 TLL2Q9Y6L7 1015 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 HACD1B0YJ81 288 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 GSTT2P0CG29 244 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 GSTT2BP0CG30 244 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 CYP2C8P10632 490 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 TNK2Q07912 1038 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 GALNT18Q6P9A2 607 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 CENPLQ8N0S6 344 aaPredicted RBP20.47■□□□□ 0.87
SHOX2-203ENST00000441443 OR2T34Q8NGX1 318 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 OR2T3Q8NH03 318 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 ZNF420Q8TAQ5 688 aaPredicted RBP20.47■□□□□ 0.87
SHOX2-203ENST00000441443 DOK1Q99704 481 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 CROTQ9UKG9 612 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 USP3Q9Y6I4 520 aa20.47■□□□□ 0.87
SHOX2-203ENST00000441443 SULT1C4O75897 302 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 SLC35E2BP0CK96 405 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 EDNRBP24530 442 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 MAP4P27816 1152 aaKnown RBP20.46■□□□□ 0.87
SHOX2-203ENST00000441443 LRPAP1P30533 357 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 RGS21Q2M5E4 152 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 TSTD2Q5T7W7 516 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 NIPAL1Q6NVV3 410 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 SPPL2CQ8IUH8 684 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 SPPL2BQ8TCT7 592 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 NXNL1Q96CM4 212 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 LRCH3Q96II8 777 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 CPB2Q96IY4 423 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 MTG1Q9BT17 334 aaPredicted RBP20.46■□□□□ 0.87
SHOX2-203ENST00000441443 ZNF408Q9H9D4 720 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 CYP3A43Q9HB55 503 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 TNFRSF12AQ9NP84 129 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 RBPJLQ9UBG7 517 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 ZBTB42B2RXF5 422 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 CFAP99D6REC4 459 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 CLOCKO15516 846 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 LCP1P13796 627 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 YBX3P16989 372 aaKnown RBP eCLIP20.46■□□□□ 0.87
SHOX2-203ENST00000441443 PLCL1Q15111 1095 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 MAP7D1Q3KQU3 841 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 LDLRAP1Q5SW96 308 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 CELF3Q5SZQ8 465 aaKnown RBP20.46■□□□□ 0.87
SHOX2-203ENST00000441443 RDH11Q8TC12 318 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 MAELQ96JY0 434 aaKnown RBP20.46■□□□□ 0.87
SHOX2-203ENST00000441443 RNF19AQ9NV58 838 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 PPP2R3BQ9Y5P8 575 aa20.46■□□□□ 0.87
SHOX2-203ENST00000441443 TRPC5OSA6NMA1 111 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 ZNF487B1APH4 448 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 UBDO15205 165 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 KCNH1O95259 989 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 IQCF3P0C7M6 154 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 TGFB3P10600 412 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 MATN1P21941 496 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 NMBRP28336 390 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 C1QTNF8P60827 252 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 NFATC3Q12968 1075 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 MXD4Q14582 209 aaPredicted RBP20.45■□□□□ 0.87
SHOX2-203ENST00000441443 SAMD4BQ5PRF9 694 aaKnown RBP20.45■□□□□ 0.87
SHOX2-203ENST00000441443 MFSD2AQ8NA29 543 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 ANKRD52Q8NB46 1076 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 SHCBP1Q8NEM2 672 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 UBP1Q9NZI7 540 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 OAZ3Q9UMX2 235 aa20.45■□□□□ 0.87
SHOX2-203ENST00000441443 SRP72O76094 671 aaKnown RBP20.45■□□□□ 0.86
SHOX2-203ENST00000441443 BAIAP3O94812 1187 aa20.45■□□□□ 0.86
SHOX2-203ENST00000441443 STAG3L1P0CL83 205 aa20.45■□□□□ 0.86
SHOX2-203ENST00000441443 PRPSAP1Q14558 356 aa20.45■□□□□ 0.86
SHOX2-203ENST00000441443 SLC36A3Q495N2 470 aa20.45■□□□□ 0.86
SHOX2-203ENST00000441443 TMEM110Q86TL2 294 aa20.45■□□□□ 0.86
SHOX2-203ENST00000441443 C7orf31Q8N865 590 aa20.45■□□□□ 0.86
SHOX2-203ENST00000441443 DUS3LQ96G46 650 aaKnown RBP20.45■□□□□ 0.86
SHOX2-203ENST00000441443 FAM167AQ96KS9 214 aa20.45■□□□□ 0.86
SHOX2-203ENST00000441443 CYP4F12Q9HCS2 524 aa20.45■□□□□ 0.86
SHOX2-203ENST00000441443 GID8Q9NWU2 228 aa20.45■□□□□ 0.86
SHOX2-203ENST00000441443 TMEM181Q9P2C4 612 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms