RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 HEPHQ9BQS7 1158 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 PARD6BQ9BYG5 372 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 FOXQ1Q9C009 403 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 FAM114A2Q9NRY5 505 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 POLR3BQ9NW08 1133 aaPredicted RBP7.56□□□□□ -1.2
UBR3-205ENST00000439681 PPM1HQ9ULR3 514 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 RAI2Q9Y5P3 530 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.56□□□□□ -1.2
UBR3-205ENST00000439681 ERI2A8K979 691 aaKnown RBP7.56□□□□□ -1.2
UBR3-205ENST00000439681 E7EVH7 732 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 USP12O75317 370 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 PIGNO95427 931 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 EPOP01588 193 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 PDHA1P08559 390 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 ATXN1LP0C7T5 689 aaKnown RBP7.56□□□□□ -1.2
UBR3-205ENST00000439681 MYBL2P10244 700 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 COL9A1P20849 921 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 MAPK8P45983 427 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 RECQLP46063 649 aaPredicted RBP7.56□□□□□ -1.2
UBR3-205ENST00000439681 VSNL1P62760 191 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 CDK18Q07002 472 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 MSLNQ13421 630 aaPredicted RBP7.56□□□□□ -1.2
UBR3-205ENST00000439681 GAS6Q14393 721 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 PCSK7Q16549 785 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 KIAA1211LQ6NV74 962 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 WDR93Q6P2C0 686 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 Q6ZS52 159 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 SYNPOQ8N3V7 929 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 IPMKQ8NFU5 416 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 RPLP0P6Q8NHW5 317 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 EDAQ92838 391 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 ERLEC1Q96DZ1 483 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 FEM1CQ96JP0 617 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 TUBGCP5Q96RT8 1024 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 UHRF1Q96T88 793 aaPredicted RBP7.56□□□□□ -1.2
UBR3-205ENST00000439681 APOL2Q9BQE5 337 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 FICDQ9BVA6 458 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 TDRD1Q9BXT4 1180 aaKnown RBP7.56□□□□□ -1.2
UBR3-205ENST00000439681 SUV39H2Q9H5I1 410 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 LRRC40Q9H9A6 602 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 TBC1D17Q9HA65 648 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 ARNT2Q9HBZ2 717 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 CASS4Q9NQ75 786 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 IL36AQ9UHA7 158 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 SARDHQ9UL12 918 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 RAB21Q9UL25 225 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 SHOC2Q9UQ13 582 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 CHKBQ9Y259 395 aa7.56□□□□□ -1.2
UBR3-205ENST00000439681 MRPS17Q9Y2R5 130 aaKnown RBP7.56□□□□□ -1.2
UBR3-205ENST00000439681 CHURC1-FNTBB4DL54 471 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 GOLGA8MH3BSY2 632 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 AVILO75366 819 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 LEFTY1O75610 366 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 PGLSO95336 258 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 C7P10643 843 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 TNFRSF8P28908 595 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 MAGEA3P43357 314 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 CHRNA4P43681 627 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 LMAN1P49257 510 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 METAP1P53582 386 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 CAV1Q03135 178 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 BCL2L1Q07817 233 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 CALCOCO2Q13137 446 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 CBLBQ13191 982 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 CUL1Q13616 776 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 ELAVL3Q14576 367 aaKnown RBP7.55□□□□□ -1.2
UBR3-205ENST00000439681 UBXN2BQ14CS0 331 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 ELF2Q15723 593 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 HSF5Q4G112 596 aaPredicted RBP7.55□□□□□ -1.2
UBR3-205ENST00000439681 FNBP1LQ5T0N5 605 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 SDE2Q6IQ49 451 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 LRRC8BQ6P9F7 803 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 TMEM92Q6UXU6 159 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 GDPD4Q6W3E5 623 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 TRMT11Q7Z4G4 463 aaKnown RBP7.55□□□□□ -1.2
UBR3-205ENST00000439681 ZSWIM9Q86XI8 627 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 AGGF1Q8N302 714 aaeCLIP7.55□□□□□ -1.2
UBR3-205ENST00000439681 EIF1ADQ8N9N8 165 aaKnown RBP7.55□□□□□ -1.2
UBR3-205ENST00000439681 TMIEQ8NEW7 156 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 OR52K1Q8NGK4 314 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 PIH1D2Q8WWB5 315 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 RUBCNQ92622 972 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 CLDN23Q96B33 292 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 ECHDC3Q96DC8 303 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 LRIG1Q96JA1 1093 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 ZNF641Q96N77 438 aaPredicted RBP7.55□□□□□ -1.2
UBR3-205ENST00000439681 TBL1YQ9BQ87 522 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 ZDHHC6Q9H6R6 413 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 ATP13A3Q9H7F0 1226 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 C2orf42Q9NWW7 574 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 NFU1Q9UMS0 254 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 ARIH1Q9Y4X5 557 aaPredicted RBP7.55□□□□□ -1.2
UBR3-205ENST00000439681 F5P12259 2224 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 TICRRQ7Z2Z1 1910 aa7.55□□□□□ -1.2
UBR3-205ENST00000439681 GOLGA6CA6NDK9 693 aa7.54□□□□□ -1.2
UBR3-205ENST00000439681 GOLGA6BA6NDN3 693 aa7.54□□□□□ -1.2
UBR3-205ENST00000439681 SMAPO00193 183 aa7.54□□□□□ -1.2
UBR3-205ENST00000439681 ALOX15BO15296 676 aa7.54□□□□□ -1.2
UBR3-205ENST00000439681 SOCS5O75159 536 aa7.54□□□□□ -1.2
UBR3-205ENST00000439681 NDST3O95803 873 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms