RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 TUBGCP3Q96CW5 907 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 IGFLR1Q9H665 355 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 CAB39LQ9H9S4 337 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 STARD13Q9Y3M8 1113 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 SSC5DA1L4H1 1573 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 GLUD1P00367 558 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 T-ENOLP0DO92 83 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 SERPINB5P36952 375 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 DSC2Q02487 901 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 PARP15Q460N3 678 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 TMTC4Q5T4D3 741 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 PKN3Q6P5Z2 889 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 PSMG2Q969U7 264 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 HMCESQ96FZ2 354 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 CNBD2Q96M20 576 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 MLPHQ9BV36 600 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 PCDHB9Q9Y5E1 797 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 SQORQ9Y6N5 450 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 C9IYK1 514 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 FMO4P31512 558 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 CXCR3P49682 368 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 CREMQ03060 361 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 HNRNPDQ14103 355 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 TDRPQ86YL5 185 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 OR10T2Q8NGX3 314 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 SDCCAG3Q96C92 435 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 FOPNLQ96NB1 174 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 DENND2DQ9H6A0 471 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 CATSPERZQ9NTU4 200 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 WWOXQ9NZC7 414 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 PKD2L2Q9NZM6 624 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 IGSF9Q9P2J2 1179 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 CORO1CQ9ULV4 474 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 CITO14578 2027 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 GNGT2O14610 69 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 ZNF197O14709 1029 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 C2P06681 752 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 CCDC166P0CW27 439 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 GNAZP19086 355 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 CALB2P22676 271 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 PTDSS1P48651 473 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 PRKAA1Q13131 559 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 GTF2H3Q13889 308 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 KPNB1Q14974 876 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 MSS51Q4VC12 460 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 C6orf10Q5SRN2 563 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 SMYD5Q6GMV2 418 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 UCMAQ8WVF2 138 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 SH3KBP1Q96B97 665 aa11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 SLC7A6OSQ96CW6 309 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 ACE2Q9BYF1 805 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRAPPC9-202ENST00000438773 C2orf71A6NGG8 1288 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 MLLT6P55198 1093 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 TBCCQ15814 346 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 ZBTB6Q15916 424 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 TRIM60Q495X7 471 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 PPP1R15BQ5SWA1 713 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 GPRIN1Q7Z2K8 1008 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 OR6K2Q8NGY2 324 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 PIWIL2Q8TC59 973 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 KCTD4Q8WVF5 259 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 AUTS2Q8WXX7 1259 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 OSBPL2Q9H1P3 480 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 MRPL40Q9NQ50 206 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 TCF7L2Q9NQB0 619 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 TLR6Q9Y2C9 796 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 ANKRD6Q9Y2G4 727 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 MRPS23Q9Y3D9 190 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 FAM237BA0A1B0GVD1 139 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 SYCE1LA8MT33 242 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 FAM189A1O60320 539 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 HLA-DPA1P20036 260 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 SERPINA4P29622 427 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 GNA12Q03113 381 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 LRRC8EQ6NSJ5 796 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 MYO1HQ8N1T3 1032 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 SNX19Q92543 992 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 OXNAD1Q96HP4 312 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 CCSER2Q9H7U1 834 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 CAAP1Q9H8G2 361 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 HBS1LQ9Y450 684 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 POLR2AP24928 1970 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 UTRNP46939 3433 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 PRR23AA6NEV1 266 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 SLCO1B7G3V0H7 640 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 PRPF4O43172 522 aaKnown RBP eCLIP11.66□□□□□ -0.543e-6■■■■□ 20.5
TRAPPC9-202ENST00000438773 EDF1O60869 148 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 PIGNO95427 931 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 FGF1P05230 155 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 ZNF7P17097 686 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 SYN1P17600 705 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 SP100P23497 879 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 GCAP28676 217 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 NUDT2P50583 147 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 PPIDQ08752 370 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 GPR17Q13304 367 aa11.66□□□□□ -0.54
TRAPPC9-202ENST00000438773 ZNF284Q2VY69 593 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms