RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 GDAP1L1Q96MZ0 367 aa7.89□□□□□ -1.15
VPS50-204ENST00000438395 IL12RB2Q99665 862 aa7.89□□□□□ -1.15
VPS50-204ENST00000438395 NCAPGQ9BPX3 1015 aa7.89□□□□□ -1.15
VPS50-204ENST00000438395 C11orf70Q9BRQ4 267 aa7.89□□□□□ -1.15
VPS50-204ENST00000438395 OSBPL1AQ9BXW6 950 aa7.89□□□□□ -1.15
VPS50-204ENST00000438395 SLC17A9Q9BYT1 436 aa7.89□□□□□ -1.15
VPS50-204ENST00000438395 STK33Q9BYT3 514 aa7.89□□□□□ -1.15
VPS50-204ENST00000438395 SYNDIG1Q9H7V2 258 aa7.89□□□□□ -1.15
VPS50-204ENST00000438395 THSD1Q9NS62 852 aa7.89□□□□□ -1.15
VPS50-204ENST00000438395 SEPT11Q9NVA2 429 aaKnown RBP7.89□□□□□ -1.15
VPS50-204ENST00000438395 TAB2Q9NYJ8 693 aa7.89□□□□□ -1.15
VPS50-204ENST00000438395 CHMP5Q9NZZ3 219 aa7.89□□□□□ -1.15
VPS50-204ENST00000438395 PPARGC1AQ9UBK2 798 aaKnown RBP7.89□□□□□ -1.15
VPS50-204ENST00000438395 OR12D3Q9UGF7 316 aa7.89□□□□□ -1.15
VPS50-204ENST00000438395 CELSR3Q9NYQ7 3312 aa7.89□□□□□ -1.15
VPS50-204ENST00000438395 WDFY3Q8IZQ1 3526 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 SPTY2D1-AS1A0A0U1RR47 76 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 IGLON5A6NGN9 336 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 C16orf96A6NNT2 1141 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 K7ESM1 405 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 SCAMP1O15126 338 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 AQP9O43315 295 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 BUB1O43683 1085 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 TLX3O43711 291 aaPredicted RBP7.88□□□□□ -1.15
VPS50-204ENST00000438395 USP12O75317 370 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 CSO75390 466 aaKnown RBP7.88□□□□□ -1.15
VPS50-204ENST00000438395 NEBLO76041 1014 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 GFPT2O94808 682 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 IGSF6O95976 241 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 PAK4O96013 591 aaPredicted RBP7.88□□□□□ -1.15
VPS50-204ENST00000438395 GSRP00390 522 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 MPOP05164 745 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 UGT2B4P06133 528 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 MMEP08473 750 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 NME1P15531 152 aaKnown RBP7.88□□□□□ -1.15
VPS50-204ENST00000438395 RBMS1P29558 406 aaKnown RBP7.88□□□□□ -1.15
VPS50-204ENST00000438395 GPC1P35052 558 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 GABREP78334 506 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 CDR2Q01850 454 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 C19orf57Q0VDD7 668 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 PTK2BQ14289 1009 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 NR0B2Q15466 257 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 DBN1Q16643 649 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 CDKN3Q16667 212 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 ZNF805Q5CZA5 627 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 TCP11X2Q5H9J9 407 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 EFHC2Q5JST6 749 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 MIIPQ5JXC2 388 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 ZNF385CQ66K41 422 aaPredicted RBP7.88□□□□□ -1.15
VPS50-204ENST00000438395 GPR155Q7Z3F1 870 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 NOP9Q86U38 636 aaKnown RBP7.88□□□□□ -1.15
VPS50-204ENST00000438395 VPS36Q86VN1 386 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 ZNF683Q8IZ20 524 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 EMC1Q8N766 993 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 ZNF248Q8NDW4 579 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 OR2AP1Q8NGE2 309 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 TPCN2Q8NHX9 752 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 IFI44Q8TCB0 444 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 LMX1AQ8TE12 382 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 CXorf40AQ8TE69 158 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 BTN2A2Q8WVV5 523 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 NAT6Q93015 286 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 ZNF837Q96EG3 531 aaPredicted RBP7.88□□□□□ -1.15
VPS50-204ENST00000438395 CRELD1Q96HD1 420 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 NAF1Q96HR8 494 aaKnown RBP7.88□□□□□ -1.15
VPS50-204ENST00000438395 APOLD1Q96LR9 279 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 ZNF578Q96N58 590 aaPredicted RBP7.88□□□□□ -1.15
VPS50-204ENST00000438395 SELENOOQ9BVL4 669 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 SLC13A1Q9BZW2 595 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 GRIP2Q9C0E4 1043 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 OSBPL2Q9H1P3 480 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 MAGEH1Q9H213 219 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 RETREG1Q9H6L5 497 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 ANLNQ9NQW6 1124 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 FAM207AQ9NSI2 230 aaPredicted RBP7.88□□□□□ -1.15
VPS50-204ENST00000438395 SPASTQ9UBP0 616 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 APOBEC3BQ9UH17 382 aaKnown RBP7.88□□□□□ -1.15
VPS50-204ENST00000438395 DNAI1Q9UI46 699 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 DOLKQ9UPQ8 538 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 ZFR2Q9UPR6 939 aaKnown RBP7.88□□□□□ -1.15
VPS50-204ENST00000438395 DAAM1Q9Y4D1 1078 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 FADS3Q9Y5Q0 445 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 HS3ST3A1Q9Y663 406 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 CSNK1G3Q9Y6M4 447 aa7.88□□□□□ -1.15
VPS50-204ENST00000438395 PLXNA2O75051 1894 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 TMEM131Q92545 1883 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 LOC400499M0QZD8 3231 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 CXorf51AA0A1B0GTR3 108 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 TEX51A0A1B0GUA7 166 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 POM121BA6NF01 834 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 I6L893 689 aaPredicted RBP7.87□□□□□ -1.15
VPS50-204ENST00000438395 ZMPSTE24O75844 475 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 POP4O95707 220 aaKnown RBP7.87□□□□□ -1.15
VPS50-204ENST00000438395 CSF2P04141 144 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 CALB1P05937 261 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 ANXA6P08133 673 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 PLEKP08567 350 aaPredicted RBP7.87□□□□□ -1.15
VPS50-204ENST00000438395 KRT3P12035 628 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 MMP8P22894 467 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 EPHB2P29323 1055 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms