RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 COL1A2P08123 1366 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 ZSWIM8A7E2V4 1837 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 KANSL1LA0AUZ9 987 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 TMEM221A6NGB7 291 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 TTC36A6NLP5 189 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 PSMD12O00232 456 aaPredicted RBP15.07■□□□□ 0
TOP3B-206ENST00000436282 RECQL4O94761 1208 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 NMBRP28336 390 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 ACADSBP45954 432 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 ACADVLP49748 655 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 PRAMEP78395 509 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 CTBSQ01459 385 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 PRKCQQ04759 706 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 FASTKQ14296 549 aaKnown RBP15.07■□□□□ 0
TOP3B-206ENST00000436282 LDLRAD1Q5T700 205 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 PIWIL4Q7Z3Z4 852 aaKnown RBP15.07■□□□□ 0
TOP3B-206ENST00000436282 DEFB106AQ8N104 65 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 PACRGLQ8N7B6 248 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 MFSD2AQ8NA29 543 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 BEST2Q8NFU1 509 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 TCF12Q99081 682 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 DCUN1D5Q9BTE7 237 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 ACOT9Q9Y305 439 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 DCLK1O15075 740 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 TIPRLO75663 272 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 PORP16435 677 aaPredicted RBP15.07■□□□□ 0
TOP3B-206ENST00000436282 LMO2P25791 158 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 NAA20P61599 178 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 DCAF4L1Q3SXM0 396 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 ZNF618Q5T7W0 954 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 SLC27A1Q6PCB7 646 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 TTC33Q6PID6 262 aaPredicted RBP15.07■□□□□ 0
TOP3B-206ENST00000436282 ERMP1Q7Z2K6 904 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 GPR142Q7Z601 462 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 UNC93AQ86WB7 457 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 SLC41A1Q8IVJ1 513 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 ZNF786Q8N393 782 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 SPPL2BQ8TCT7 592 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 MLPHQ9BV36 600 aaPredicted RBP15.07■□□□□ 0
TOP3B-206ENST00000436282 UPF3AQ9H1J1 476 aaKnown RBP15.07■□□□□ 0
TOP3B-206ENST00000436282 GBA3Q9H227 469 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 GOLGA2P5Q9HBQ8 144 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 ARMC1Q9NVT9 282 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 GTSE1Q9NYZ3 720 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 TMEM181Q9P2C4 612 aa15.07■□□□□ 0
TOP3B-206ENST00000436282 EEF2KO00418 725 aaKnown RBP15.06■□□□□ 0
TOP3B-206ENST00000436282 ZBTB24O43167 697 aaPredicted RBP15.06■□□□□ 0
TOP3B-206ENST00000436282 AKAP10O43572 662 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 STAMBPO95630 424 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 MYF6P23409 242 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 DUSP28Q4G0W2 176 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 AGKQ53H12 422 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 DHFR2Q86XF0 187 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 NDRG1Q92597 394 aaKnown RBP15.06■□□□□ 0
TOP3B-206ENST00000436282 BORCS5Q969J3 196 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 SNX27Q96L92 541 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 GPR78Q96P69 363 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 GJD2Q9UKL4 321 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 CDC14AQ9UNH5 594 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 SYNJ2BP-COX16A0A087WUM0 186 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 TRIM64A6NGJ6 449 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 ZNF839A8K0R7 811 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 SRP72O76094 671 aaKnown RBP15.06■□□□□ 0
TOP3B-206ENST00000436282 SNRPB2P08579 225 aaKnown RBP15.06■□□□□ 0
TOP3B-206ENST00000436282 RPL10P27635 214 aaKnown RBP15.06■□□□□ 0
TOP3B-206ENST00000436282 SLC5A3P53794 718 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 NME5P56597 212 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 ANKDD1AQ495B1 522 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 OTUD1Q5VV17 481 aaPredicted RBP15.06■□□□□ 0
TOP3B-206ENST00000436282 FAM45BPQ6NSW5 357 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 FAM45AQ8TCE6 357 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 FAR2Q96K12 515 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 COX4I2Q96KJ9 171 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 APOL2Q9BQE5 337 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 COX16Q9P0S2 106 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 CROTQ9UKG9 612 aa15.06■□□□□ 0
TOP3B-206ENST00000436282 PIN4Q9Y237 131 aaKnown RBP15.06■□□□□ 0
TOP3B-206ENST00000436282 RBM47A0AV96 593 aaKnown RBP15.05■□□□□ 0
TOP3B-206ENST00000436282 MRASO14807 208 aa15.05■□□□□ 0
TOP3B-206ENST00000436282 UBDO15205 165 aa15.05■□□□□ 0
TOP3B-206ENST00000436282 HSPA8P11142 646 aaKnown RBP15.05■□□□□ 0
TOP3B-206ENST00000436282 CD68P34810 354 aaPredicted RBP15.05■□□□□ 0
TOP3B-206ENST00000436282 RAB10P61026 200 aa15.05■□□□□ 0
TOP3B-206ENST00000436282 PFKPQ01813 784 aa15.05■□□□□ 0
TOP3B-206ENST00000436282 SPIDRQ14159 915 aa15.05■□□□□ 0
TOP3B-206ENST00000436282 INTS11Q5TA45 600 aaKnown RBP15.05■□□□□ 0
TOP3B-206ENST00000436282 C9orf57Q5W0N0 161 aa15.05■□□□□ 0
TOP3B-206ENST00000436282 CNSTQ6PJW8 725 aa15.05■□□□□ 0
TOP3B-206ENST00000436282 HACD2Q6Y1H2 254 aa15.05■□□□□ 0
TOP3B-206ENST00000436282 PDZD4Q76G19 769 aaPredicted RBP15.05■□□□□ 0
TOP3B-206ENST00000436282 LYSMD3Q7Z3D4 306 aa15.05■□□□□ 0
TOP3B-206ENST00000436282 OR2T34Q8NGX1 318 aa15.05■□□□□ 0
TOP3B-206ENST00000436282 OR2T3Q8NH03 318 aa15.05■□□□□ 0
TOP3B-206ENST00000436282 ZNF420Q8TAQ5 688 aaPredicted RBP15.05■□□□□ 0
TOP3B-206ENST00000436282 ZC3H15Q8WU90 426 aaKnown RBP15.05■□□□□ 0
TOP3B-206ENST00000436282 EMID1Q96A84 441 aaPredicted RBP15.05■□□□□ 0
TOP3B-206ENST00000436282 NXNL1Q96CM4 212 aa15.05■□□□□ 0
TOP3B-206ENST00000436282 OMDQ99983 421 aa15.05■□□□□ 0
TOP3B-206ENST00000436282 MRPL46Q9H2W6 279 aaKnown RBP15.05■□□□□ 0
TOP3B-206ENST00000436282 ADAMTS10Q9H324 1103 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms