RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 A0A1W2PQ67 120 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 CAPN14A8MX76 684 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 ELP6Q0PNE2 266 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 DNAJC14Q6Y2X3 702 aaPredicted RBP11.28□□□□□ -0.6
SCN4A-201ENST00000435607 RAD51AP1Q96B01 352 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 ACTL7BQ9Y614 415 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 C9J4A7 227 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 SP2Q02086 613 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 PLPP4Q5VZY2 271 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 METTL16Q86W50 562 aaKnown RBP11.28□□□□□ -0.6
SCN4A-201ENST00000435607 SHDQ96IW2 340 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 THAP1Q9NVV9 213 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 SHOC2Q9UQ13 582 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 ANKRD65E5RJM6 399 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 APOC1P02654 83 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 ACLYP53396 1101 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 SLC6A3Q01959 620 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 CNSTQ6PJW8 725 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 PTCD2Q8WV60 388 aaKnown RBP11.28□□□□□ -0.6
SCN4A-201ENST00000435607 AIF1LQ9BQI0 150 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 SLC25A23Q9BV35 468 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 DEC1Q9P2X7 70 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 RIC1Q4ADV7 1423 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 CNTNAP5Q8WYK1 1306 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 A0A087X0B3 334 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 FGBP02675 491 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 CCT3P49368 545 aaKnown RBP11.28□□□□□ -0.6
SCN4A-201ENST00000435607 MTTPP55157 894 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 RASGEF1BQ0VAM2 473 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 GRSF1Q12849 480 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCN4A-201ENST00000435607 OVGP1Q12889 678 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 HSDL2Q6YN16 418 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 BEND5Q7L4P6 421 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 MYDGFQ969H8 173 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 ERGIC2Q96RQ1 377 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 TSPAN18Q96SJ8 248 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 SLC38A3Q99624 504 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 KIAA1683Q9H0B3 1180 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 POMKQ9H5K3 350 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 ERVW-1Q9UQF0 538 aa11.28□□□□□ -0.6
SCN4A-201ENST00000435607 SLC28A2O43868 658 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 CASP6P55212 293 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 TAPT1Q6NXT6 567 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 CHST15Q7LFX5 561 aaPredicted RBP11.27□□□□□ -0.6
SCN4A-201ENST00000435607 LIX1Q8N485 282 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 ZNF879B4DU55 563 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 ERAL1O75616 437 aaKnown RBP11.27□□□□□ -0.6
SCN4A-201ENST00000435607 HMGCRP04035 888 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 FDPSP14324 419 aaKnown RBP11.27□□□□□ -0.6
SCN4A-201ENST00000435607 CCL23P55773 120 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 LPCAT2Q7L5N7 544 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 ADAMTSL2Q86TH1 951 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 C17orf64Q86WR6 236 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 MPP5Q8N3R9 675 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 ADCY4Q8NFM4 1077 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 GAD1Q99259 594 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 MCUBQ9NWR8 336 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 GLS2Q9UI32 602 aa11.27□□□□□ -0.6
SCN4A-201ENST00000435607 PGRMC2O15173 223 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 IL12BP29460 328 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 SWI5Q1ZZU3 235 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 RNF43Q68DV7 783 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 ANKFN1Q8N957 763 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 IMP3Q9NV31 184 aaKnown RBP11.27□□□□□ -0.61
SCN4A-201ENST00000435607 C1orf232A0A0U1RR37 186 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 CLOCKO15516 846 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 PSMD5Q16401 504 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 AP2M1Q96CW1 435 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 RNF31Q96EP0 1072 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 GLIS2Q9BZE0 524 aaPredicted RBP11.27□□□□□ -0.61
SCN4A-201ENST00000435607 DCLRE1BQ9H816 532 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 CLUHO75153 1309 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 A0A0J9YVX5 310 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 ENTPD5O75356 428 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 RECQL4O94761 1208 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 OR5F1O95221 314 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 FAM58BPP0C7Q3 252 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 MGAT1P26572 445 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 PGM5Q15124 567 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 NIPA1Q7RTP0 329 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 ABRAQ8N0Z2 381 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 ZNF276Q8N554 614 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 SLC9A6Q92581 669 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 GMIPQ9P107 970 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 HOXB6P17509 224 aaKnown RBP11.27□□□□□ -0.61
SCN4A-201ENST00000435607 TPH1P17752 444 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 SLC6A2P23975 617 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 SCRN3Q0VDG4 424 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 PRR23BQ6ZRT6 265 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 OFCC1Q8IZS5 231 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 OR2L5Q8NG80 312 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 ACER1Q8TDN7 264 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 CDHR5Q9HBB8 845 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 KCTD5Q9NXV2 234 aa11.27□□□□□ -0.61
SCN4A-201ENST00000435607 SLC15A5A6NIM6 579 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 DDX3XO00571 662 aaKnown RBP eCLIP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 RGS20O76081 388 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 NTRK1P04629 796 aa11.26□□□□□ -0.61
SCN4A-201ENST00000435607 PSRC1Q6PGN9 363 aaPredicted RBP11.26□□□□□ -0.61
SCN4A-201ENST00000435607 ATG9AQ7Z3C6 839 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms