RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SCUBE2Q9NQ36 999 aa7.52□□□□□ -1.2
CPSF6-202ENST00000435070 SYBUQ9NX95 663 aa7.52□□□□□ -1.2
CPSF6-202ENST00000435070 COL18A1P39060 1754 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 GCATO75600 419 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 SRP72O76094 671 aaKnown RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 ALOX5P09917 674 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 MAPTP10636 758 aaKnown RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 BMP4P12644 408 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CHRM3P20309 590 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 GP5P40197 560 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 ARPP19P56211 112 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CCNA1P78396 465 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 STX5Q13190 355 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CYP51A1Q16850 503 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 SMU1Q2TAY7 513 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 LRIT3Q3SXY7 679 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 SNAP47Q5SQN1 464 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 C15orf39Q6ZRI6 1047 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 RNF135Q8IUD6 432 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CNTD1Q8N815 330 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 FBRSL1Q9HCM7 1045 aaKnown RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 PCM1Q15154 2024 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 FAM155AB1AL88 458 aaPredicted RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 GPR25O00155 361 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CCNKO75909 580 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 PCNAP12004 261 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CAPGP40121 348 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 JAG1P78504 1218 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF460Q14592 562 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 SPATC1Q76KD6 591 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 PAGE2Q7Z2X7 111 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 ANKFN1Q8N957 763 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 PCDH19Q8TAB3 1148 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 PIWIL1Q96J94 861 aaKnown RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 MSTO1Q9BUK6 570 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 FRMD8P1Q9BZ68 369 aaPredicted RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 TMEM9Q9P0T7 183 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 SLCO3A1Q9UIG8 710 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 TCRBV3S1A0A5B6 114 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 TBXAS1P24557 533 aaPredicted RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CXCR2P25025 360 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CNTFP26441 200 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CASP2P42575 452 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 BAG6P46379 1132 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 RGS7P49802 495 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 TMBIM6P55061 237 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 C6orf10Q5SRN2 563 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 BROXQ5VW32 411 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 KIAA0408Q6ZU52 694 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 KCTD17Q8N5Z5 321 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 TMEM143Q96AN5 459 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 LRRC39Q96DD0 335 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CCDC17Q96LX7 622 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 C9orf16Q9BUW7 83 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 MTMR10Q9NXD2 777 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 SMPD3Q9NY59 655 aaPredicted RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 EXTL3O43909 919 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 ICMTO60725 284 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 TADA2AO75478 443 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 DAB1O75553 588 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 IFNA8P32881 189 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CCDC81Q6ZN84 652 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 R3HCC1LQ7Z5L2 792 aaKnown RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 KCTD4Q8WVF5 259 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 PSD2Q9BQI7 771 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 TLK1Q9UKI8 766 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 BAG5Q9UL15 447 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 RUVBL2Q9Y230 463 aaKnown RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 MFHAS1Q9Y4C4 1052 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 PCDHGA11Q9Y5H2 935 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 PLIN4Q96Q06 1357 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 INMTO95050 263 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 MBL2P11226 248 aaPredicted RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 BMP2P12643 396 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 PRKACBP22694 351 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CES1P23141 567 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 SHMT2P34897 504 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 RPS9P46781 194 aaKnown RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 HLCSP50747 726 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 VBP1P61758 197 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 YBX1P67809 324 aaKnown RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 TAP1Q03518 808 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 PRKAA1Q13131 559 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 LAMC2Q13753 1193 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 FUT11Q495W5 492 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CEP78Q5JTW2 689 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CCNYL2Q5T2Q4 361 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 CDR2LQ86X02 465 aaPredicted RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 ARMC8Q8IUR7 673 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 ATP6V0D2Q8N8Y2 350 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 URGCPQ8TCY9 931 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 ACER1Q8TDN7 264 aa7.52□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF668Q96K58 619 aaPredicted RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 ZNF641Q96N77 438 aaPredicted RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 WDR12Q9GZL7 423 aaKnown RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 ARIH1Q9Y4X5 557 aaPredicted RBP7.52□□□□□ -1.21
CPSF6-202ENST00000435070 RAD51BO15315 384 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 PTPN2P17706 415 aa7.51□□□□□ -1.21
CPSF6-202ENST00000435070 PSMA4P25789 261 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms