RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 LRRC53A6NM62 1247 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 HSPB2A8KAH6 182 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 KLRF2D3W0D1 207 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 PTGES3LE9PB15 166 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 F8W810 466 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 RHODO00212 210 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 KIF1CO43896 1103 aaKnown RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 RBMXL2O75526 392 aaKnown RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 ERAL1O75616 437 aaKnown RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 CSPG5O95196 566 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 MT-CYBP00156 380 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 IL1AP01583 271 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 CD63P08962 238 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 MYZAPP0CAP1 466 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 PRR35P0CG20 571 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 SLC2A4P14672 509 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 GABRB1P18505 474 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 ATP5F1P24539 256 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 NFKBIAP25963 317 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 POU1F1P28069 291 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 HOXA13P31271 388 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 DCTDP32321 178 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 SHMT1P34896 483 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 RPS13P62277 151 aaKnown RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 IFI35P80217 286 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 PMPCAQ10713 525 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 SLC10A2Q12908 348 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 GRIK3Q13003 919 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 HSPB2Q16082 182 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 HIST2H2ACQ16777 129 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 ASTE1Q2TB18 679 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 SGO1Q5FBB7 561 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 RAB41Q5JT25 222 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 PMS2CLQ68D20 193 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 PLEKHA7Q6IQ23 1121 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 PRPF39Q86UA1 669 aaKnown RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 IGFN1Q86VF2 1251 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 SLC25A41Q8N5S1 370 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 GTF3C6Q969F1 213 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 EME1Q96AY2 570 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 PGAM5Q96HS1 289 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 FEM1CQ96JP0 617 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 C1orf74Q96LT6 269 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 SIGLEC11Q96RL6 698 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 SEMA4CQ9C0C4 833 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 SCAND2PQ9GZW5 306 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 TKTL2Q9H0I9 626 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 KLHL31Q9H511 634 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 MVB12BQ9H7P6 319 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 PDGFCQ9NRA1 345 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 SLC6A13Q9NSD5 602 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 WSB2Q9NYS7 404 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 KLHL13Q9P2N7 655 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 SUCLA2Q9P2R7 463 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 IPO11Q9UI26 975 aaKnown RBP3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 HAO1Q9UJM8 370 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 UTS2RQ9UKP6 389 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 SLC8A2Q9UPR5 921 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 CARD8Q9Y2G2 431 aa3.3□□□□□ -1.88
HMGB1P27-201ENST00000431429 UTYO14607 1347 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 DDTLA6NHG4 134 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 MYO1GB0I1T2 1018 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 ZNF814B7Z6K7 855 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 E5RJQ4 531 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 HSPB6O14558 160 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 PRPF4O43172 522 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 SEC14L5O43304 696 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 HCRTR2O43614 444 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 TLR2O60603 784 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 TSPAN9O75954 239 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 CLDN7O95471 211 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 SLPIP03973 132 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 IRF1P10914 325 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 BMP5P22003 454 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 TNFSF8P32971 234 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 GPR12P47775 334 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 GNAQP50148 359 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 PRAMEP78395 509 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 STK4Q13043 487 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 CHAF1BQ13112 559 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 STIM1Q13586 685 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 ZNF268Q14587 947 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 CRYMQ14894 314 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 KRT24Q2M2I5 525 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 KRTAP15-1Q3LI76 137 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 SLC9C1Q4G0N8 1177 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 PLEKHO1Q53GL0 409 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 RILPL1Q5EBL4 403 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 CEP78Q5JTW2 689 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 TMEM71Q6P5X7 295 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 GLDNQ6ZMI3 551 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 CFAP77Q6ZQR2 320 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 CHST9Q7L1S5 443 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 KRT77Q7Z794 578 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 PIP4P1Q86T03 277 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 TBC1D26Q86UD7 250 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 GPSM1Q86YR5 675 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 FAM185AQ8N0U4 392 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 RBFAQ8N0V3 343 aa3.29□□□□□ -1.88
HMGB1P27-201ENST00000431429 SRBD1Q8N5C6 995 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms