RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 GDPD4Q6W3E5 623 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 KBTBD6Q86V97 674 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 CACUL1Q86Y37 369 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 TMPRSS6Q8IU80 811 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 MMAAQ8IVH4 418 aaKnown RBP11.12□□□□□ -0.63
CHD4-202ENST00000430771 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHD4-202ENST00000430771 HCAR2Q8TDS4 363 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 HMGB4Q8WW32 186 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 SIPA1Q96FS4 1042 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 RBM15Q96T37 977 aaKnown RBP eCLIP11.12□□□□□ -0.635e-9■□□□□ 8.4
CHD4-202ENST00000430771 C1QTNF1Q9BXJ1 281 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 MKRN2Q9H000 416 aaKnown RBP11.12□□□□□ -0.63
CHD4-202ENST00000430771 RAB17Q9H0T7 212 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 PABPC3Q9H361 631 aaKnown RBP11.12□□□□□ -0.63
CHD4-202ENST00000430771 EPHX3Q9H6B9 360 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 NOD2Q9HC29 1040 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 CD248Q9HCU0 757 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 PRMT8Q9NR22 394 aaPredicted RBP11.12□□□□□ -0.63
CHD4-202ENST00000430771 PPM1HQ9ULR3 514 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 RAI2Q9Y5P3 530 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 TSPAN11A1L157 253 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 PRR33A8MZF0 331 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 F5H423 210 aaPredicted RBP11.11□□□□□ -0.63
CHD4-202ENST00000430771 TTI1O43156 1089 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 PI15O43692 258 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 GJB3O75712 270 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 C7P10643 843 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 ETS1P14921 441 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 GABRG2P18507 467 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 XPAP23025 273 aaPredicted RBP11.11□□□□□ -0.63
CHD4-202ENST00000430771 RPL22P35268 128 aaKnown RBP11.11□□□□□ -0.63
CHD4-202ENST00000430771 VPS41P49754 854 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 SUOXP51687 545 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 NEK3P51956 506 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 RPS14P62263 151 aaKnown RBP11.11□□□□□ -0.63
CHD4-202ENST00000430771 NIPAL4Q0D2K0 466 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 TRAF2Q12933 501 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 GPS1Q13098 491 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 SEMA5AQ13591 1074 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 TRIP13Q15645 432 aaPredicted RBP11.11□□□□□ -0.63
CHD4-202ENST00000430771 ZNF805Q5CZA5 627 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 ARSIQ5FYB1 569 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 NAPEPLDQ6IQ20 393 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 NDUFAF2Q8N183 169 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 PGBD3Q8N328 593 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 MMGT1Q8N4V1 131 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 TMEM105Q8N8V8 129 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 GLIS1Q8NBF1 620 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 IPMKQ8NFU5 416 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 PDCD6IPQ8WUM4 868 aaKnown RBP11.11□□□□□ -0.63
CHD4-202ENST00000430771 ERLEC1Q96DZ1 483 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 IFT43Q96FT9 208 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 OXNAD1Q96HP4 312 aaPredicted RBP11.11□□□□□ -0.63
CHD4-202ENST00000430771 FEM1CQ96JP0 617 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 MRGPRX1Q96LB2 322 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 KLHL32Q96NJ5 620 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 FAM129BQ96TA1 746 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 CARD6Q9BX69 1037 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 SUV39H2Q9H5I1 410 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 LRRC40Q9H9A6 602 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 EIF2B3Q9NR50 452 aaKnown RBP11.11□□□□□ -0.63
CHD4-202ENST00000430771 RAB6BQ9NRW1 208 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 DKK3Q9UBP4 350 aa11.11□□□□□ -0.63
CHD4-202ENST00000430771 ARIH1Q9Y4X5 557 aaPredicted RBP11.11□□□□□ -0.63
CHD4-202ENST00000430771 PLXND1Q9Y4D7 1925 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 TTC24A2A3L6 582 aaPredicted RBP11.1□□□□□ -0.63
CHD4-202ENST00000430771 FAM86C2PA6NEL3 165 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 UPK3BL1B0FP48 263 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 UPK3BL2E5RIL1 263 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 TRAFD1O14545 582 aaPredicted RBP11.1□□□□□ -0.63
CHD4-202ENST00000430771 MID1O15344 667 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 SLC7A4O43246 635 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 HTRA2O43464 458 aaPredicted RBP11.1□□□□□ -0.63
CHD4-202ENST00000430771 RAD51CO43502 376 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 ZNF217O75362 1048 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 PMPCBO75439 489 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 PGLSO95336 258 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 METTL18O95568 372 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 AP2A1O95782 977 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 MT-CYBP00156 380 aaPredicted RBP11.1□□□□□ -0.63
CHD4-202ENST00000430771 FGF1P05230 155 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 MMP2P08253 660 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 ZSCAN5DPP0CG00 497 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 HLA-DPA1P20036 260 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 TPSB2P20231 275 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 GKP32189 559 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 SLC8A1P32418 973 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 PTGIRP43119 386 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 GRIA4P48058 902 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 NUBP1P53384 320 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 EPHB1P54762 984 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 RPL26P61254 145 aaKnown RBP11.1□□□□□ -0.63
CHD4-202ENST00000430771 POLR2LP62875 67 aaKnown RBP11.1□□□□□ -0.63
CHD4-202ENST00000430771 CDK18Q07002 472 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 TPSAB1Q15661 275 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 PCSK7Q16549 785 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 TMEM31Q5JXX7 168 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 FAXCQ5TGI0 409 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 KDELC1Q6UW63 502 aa11.1□□□□□ -0.63
CHD4-202ENST00000430771 USP30Q70CQ3 517 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms