RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 FZD4Q9ULV1 537 aa10.29□□□□□ -0.76
ATG4B-212ENST00000430617 USP3Q9Y6I4 520 aa10.29□□□□□ -0.76
ATG4B-212ENST00000430617 CSMD2Q7Z408 3487 aa10.29□□□□□ -0.76
ATG4B-212ENST00000430617 TBC1D3DA0A087WVF3 549 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 TBC1D3IA0A087WXS9 549 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 TBC1D3EA0A087X179 549 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 TBC1D3KA0A087X1G2 549 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 TBC1D3FA6NER0 549 aaPredicted RBP10.28□□□□□ -0.76
ATG4B-212ENST00000430617 TBC1D3LB9A6J9 549 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 K7ESM1 405 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 DDX3YO15523 660 aaKnown RBP10.28□□□□□ -0.76
ATG4B-212ENST00000430617 FBXO21O94952 628 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 TBC1D3HP0C7X1 549 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 KRT3P12035 628 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 LCP1P13796 627 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 COMTP21964 271 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 CTNNA2P26232 953 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 COL8A1P27658 744 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 CD70P32970 193 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 MLLT3P42568 568 aaPredicted RBP10.28□□□□□ -0.76
ATG4B-212ENST00000430617 MARCKSL1P49006 195 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 METAP1P53582 386 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 SFSWAPQ12872 951 aaKnown RBP10.28□□□□□ -0.76
ATG4B-212ENST00000430617 MESDQ14696 234 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 TAF5Q15542 800 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 C9orf64Q5T6V5 341 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 OTUD1Q5VV17 481 aaPredicted RBP10.28□□□□□ -0.76
ATG4B-212ENST00000430617 TBC1D3GQ6DHY5 549 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 PM20D1Q6GTS8 502 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 TBC1D3CQ6IPX1 549 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 RBM44Q6ZP01 1051 aaKnown RBP10.28□□□□□ -0.76
ATG4B-212ENST00000430617 C14orf80Q86SX3 495 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 FAM217AQ8IXS0 508 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 TBC1D3Q8IZP1 549 aaPredicted RBP10.28□□□□□ -0.76
ATG4B-212ENST00000430617 SIX6OS1Q8N1H7 587 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.28□□□□□ -0.76
ATG4B-212ENST00000430617 WFIKKN2Q8TEU8 576 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 IRGQQ8WZA9 623 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 ZNF592Q92610 1267 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 GRAMD1AQ96CP6 724 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 SLC2A13Q96QE2 648 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 FAM129BQ96TA1 746 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 L2HGDHQ9H9P8 463 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 LRRC4Q9HBW1 653 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 NLGN3Q9NZ94 848 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 IP6K2Q9UHH9 426 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 RASAL2Q9UJF2 1139 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 GGA2Q9UJY4 613 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 SNX12Q9UMY4 172 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 PACSIN2Q9UNF0 486 aaPredicted RBP10.28□□□□□ -0.76
ATG4B-212ENST00000430617 HYOU1Q9Y4L1 999 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 ALG6Q9Y672 507 aa10.28□□□□□ -0.76
ATG4B-212ENST00000430617 TNRC6AQ8NDV7 1962 aaKnown RBP10.28□□□□□ -0.76
ATG4B-212ENST00000430617 NF1P21359 2839 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 CCDC187A0A096LP49 1063 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.27□□□□□ -0.77
ATG4B-212ENST00000430617 CPED1A4D0V7 1026 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 TMEM110-MUSTN1A8MSY1 372 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 MYO1FO00160 1098 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 SART1O43290 800 aaKnown RBP10.27□□□□□ -0.77
ATG4B-212ENST00000430617 HSF2BPO75031 334 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 GLI1P08151 1106 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 PABPC1P11940 636 aaKnown RBP10.27□□□□□ -0.77
ATG4B-212ENST00000430617 GOT1P17174 413 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 GPD1P21695 349 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 CTNNA1P35221 906 aaKnown RBP10.27□□□□□ -0.77
ATG4B-212ENST00000430617 SLC1A1P43005 524 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 PTPN9P43378 593 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 PSMD8P48556 350 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 HARS2P49590 506 aaKnown RBP10.27□□□□□ -0.77
ATG4B-212ENST00000430617 SGSHP51688 502 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 ZNF143P52747 638 aaPredicted RBP10.27□□□□□ -0.77
ATG4B-212ENST00000430617 EFEMP1Q12805 493 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 OVGP1Q12889 678 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 ZNF177Q13360 481 aaPredicted RBP10.27□□□□□ -0.77
ATG4B-212ENST00000430617 STAT4Q14765 748 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 ZNF542PQ5EBM4 170 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 DNTTIP2Q5QJE6 756 aaKnown RBP10.27□□□□□ -0.77
ATG4B-212ENST00000430617 PERM1Q5SV97 790 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 DCUN1D2Q6PH85 259 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 SND1Q7KZF4 910 aaKnown RBP eCLIP10.27□□□□□ -0.77
ATG4B-212ENST00000430617 EFL1Q7Z2Z2 1120 aaKnown RBP10.27□□□□□ -0.77
ATG4B-212ENST00000430617 PEX26Q7Z412 305 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 BNIPLQ7Z465 357 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 AHI1Q8N157 1196 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 ARFGAP1Q8N6T3 406 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 KRT35Q92764 455 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 MIB2Q96AX9 1013 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 KLHDC7BQ96G42 594 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 DCLK3Q9C098 648 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 ADNPQ9H2P0 1102 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 AMFRQ9UKV5 643 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 PCDHGA7Q9Y5G6 932 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 MRFAP1Q9Y605 127 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 PDZD2O15018 2839 aa10.27□□□□□ -0.77
ATG4B-212ENST00000430617 APCP25054 2843 aa10.26□□□□□ -0.77
ATG4B-212ENST00000430617 A1L4Q6 167 aa10.26□□□□□ -0.77
ATG4B-212ENST00000430617 YJEFN3A6XGL0 299 aa10.26□□□□□ -0.77
ATG4B-212ENST00000430617 MIF4GDA9UHW6 222 aaKnown RBP10.26□□□□□ -0.77
ATG4B-212ENST00000430617 E7ENQ6 273 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms