RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 PPFIBP2Q8ND30 876 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 CD99L2Q8TCZ2 262 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 SCG3Q8WXD2 468 aaKnown RBP13.82□□□□□ -0.2
THBS3-202ENST00000428962 DNAJC9Q8WXX5 260 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 CDK5RAP1Q96SZ6 601 aaKnown RBP13.82□□□□□ -0.2
THBS3-202ENST00000428962 ATXN3LQ9H3M9 355 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 TRIM17Q9Y577 477 aa13.82□□□□□ -0.2
THBS3-202ENST00000428962 DOCK4Q8N1I0 1966 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 MIA3Q5JRA6 1907 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 SLC12A8A0AV02 714 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 MTMR11A4FU01 709 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 TARM1B6A8C7 271 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 J3KR12 359 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 HOXA2O43364 376 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 NPHS1O60500 1241 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 ATP6V1C1P21283 382 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 MPSTP25325 297 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 NUMBP49757 651 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 ARPP19P56211 112 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 SESN3P58005 492 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 AP2B1P63010 937 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 SLC10A7Q0GE19 358 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 TAF10Q12962 218 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 GPR17Q13304 367 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 NAA25Q14CX7 972 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 POLD3Q15054 466 aaPredicted RBP13.81□□□□□ -0.2
THBS3-202ENST00000428962 FAM83EQ2M2I3 478 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 SLC9B1Q4ZJI4 515 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 KLC3Q6P597 504 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 LRRC74BQ6ZQY2 392 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 KDELC2Q7Z4H8 507 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 CEP97Q8IW35 865 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 TTC9BQ8N6N2 239 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 RAET1EQ8TD07 263 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 PSMG2Q969U7 264 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 CCDC126Q96EE4 140 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 RPRD1AQ96P16 312 aaPredicted RBP13.81□□□□□ -0.2
THBS3-202ENST00000428962 MYCBPQ99417 103 aaPredicted RBP13.81□□□□□ -0.2
THBS3-202ENST00000428962 SEPT5Q99719 369 aaPredicted RBP13.81□□□□□ -0.2
THBS3-202ENST00000428962 SLC7A8Q9UHI5 535 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 MRPL42Q9Y6G3 142 aaKnown RBP13.81□□□□□ -0.2
THBS3-202ENST00000428962 VWA8A3KMH1 1905 aa13.81□□□□□ -0.2
THBS3-202ENST00000428962 E9PBE3 544 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 SLC7A4O43246 635 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 DCXO43602 365 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 KLHL41O60662 606 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 FKBP6O75344 327 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 CNTN5O94779 1100 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 PIGNO95427 931 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 ALDH2P05091 517 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 SBK3P0C264 359 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 HAPLN1P10915 354 aaPredicted RBP13.8□□□□□ -0.2
THBS3-202ENST00000428962 GLDCP23378 1020 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 ADSLP30566 484 aaPredicted RBP13.8□□□□□ -0.2
THBS3-202ENST00000428962 LEPRP48357 1165 aaKnown RBP13.8□□□□□ -0.2
THBS3-202ENST00000428962 NAGLUP54802 743 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 TAS2R39P59534 338 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 DNAJB13P59910 316 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 CAP1Q01518 475 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 DSC2Q02487 901 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 BFSP2Q13515 415 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 SERINC3Q13530 473 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 ARL13AQ5H913 290 aaPredicted RBP13.8□□□□□ -0.2
THBS3-202ENST00000428962 TMCO4Q5TGY1 634 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 AGAP9Q5VTM2 703 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 PIWIL4Q7Z3Z4 852 aaKnown RBP13.8□□□□□ -0.2
THBS3-202ENST00000428962 SETD3Q86TU7 594 aaPredicted RBP13.8□□□□□ -0.2
THBS3-202ENST00000428962 MFSD6LQ8IWD5 586 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 POU5F2Q8N7G0 328 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 ACTRT2Q8TDY3 377 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 PXYLP1Q8TE99 480 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 NXNL1Q96CM4 212 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 CNDP1Q96KN2 507 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 GPR78Q96P69 363 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 KLHL5Q96PQ7 755 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 CCDC28BQ9BUN5 200 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 MRPL9Q9BYD2 267 aaKnown RBP13.8□□□□□ -0.2
THBS3-202ENST00000428962 SEZ6LQ9BYH1 1024 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 RETREG1Q9H6L5 497 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 NCKIPSDQ9NZQ3 722 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 LRFN2Q9ULH4 789 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 ARHGAP26Q9UNA1 814 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 CDYLQ9Y232 598 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 A0A088AWK7 358 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 GOLGA8QA0A0J9YX86 632 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 GOLGA8OA6NCC3 632 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 GOLGA8NF8WBI6 632 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 ARVCFO00192 962 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 LIN7AO14910 233 aaPredicted RBP13.8□□□□□ -0.2
THBS3-202ENST00000428962 DLX3O60479 287 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 CHRNGP07510 517 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 MMP2P08253 660 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 COX4I1P13073 169 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 ATP5F1P24539 256 aaPredicted RBP13.8□□□□□ -0.2
THBS3-202ENST00000428962 MAXP61244 160 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 SLC25A3Q00325 362 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 KLF10Q13118 480 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 ZNF460Q14592 562 aa13.8□□□□□ -0.2
THBS3-202ENST00000428962 LBRQ14739 615 aaKnown RBP13.8□□□□□ -0.2
THBS3-202ENST00000428962 FUT10Q6P4F1 479 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms