RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ATP13A3Q9H7F0 1226 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 RXFP3Q9NSD7 469 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMC1A-203ENST00000428014 DDX56Q9NY93 547 aaKnown RBP9.26□□□□□ -0.93
SMC1A-203ENST00000428014 LHX3Q9UBR4 397 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 PCSK1NQ9UHG2 260 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 IPO11Q9UI26 975 aaKnown RBP9.26□□□□□ -0.93
SMC1A-203ENST00000428014 DNPEPQ9ULA0 475 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 ANKRD6Q9Y2G4 727 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 PPIL1Q9Y3C6 166 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 ACACBO00763 2458 aa9.26□□□□□ -0.93
SMC1A-203ENST00000428014 A0A1B0GTQ1 180 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 RCCD1A6NED2 376 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 C16orf96A6NNT2 1141 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 PSMD11O00231 422 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 HTRA2O43464 458 aaPredicted RBP9.25□□□□□ -0.93
SMC1A-203ENST00000428014 PSTPIP1O43586 416 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 MAFKO60675 156 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 CBFA2T3O75081 653 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 PALMO75781 387 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 FSBPO95073 299 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 IPO7O95373 1038 aaKnown RBP9.25□□□□□ -0.93
SMC1A-203ENST00000428014 PEX11BO96011 259 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 C1SP09871 688 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 CD59P13987 128 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 CCNCP24863 283 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 TEAD1P28347 426 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 SERPINA4P29622 427 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 AKT2P31751 481 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 GRK6P43250 576 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 NR2C2P49116 596 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 PEX5P50542 639 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 PAPOLAP51003 745 aaKnown RBP9.25□□□□□ -0.93
SMC1A-203ENST00000428014 ADKP55263 362 aaKnown RBP9.25□□□□□ -0.93
SMC1A-203ENST00000428014 NXPH1P58417 271 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 RPL26P61254 145 aaKnown RBP9.25□□□□□ -0.93
SMC1A-203ENST00000428014 YPEL5P62699 121 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 DPYSL3Q14195 570 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 STAT4Q14765 748 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 CYTH1Q15438 398 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 SPA17Q15506 151 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 TAZQ16635 292 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 ZNF284Q2VY69 593 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 TMEM52BQ4KMG9 183 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 PPP6R3Q5H9R7 873 aaPredicted RBP9.25□□□□□ -0.93
SMC1A-203ENST00000428014 C11orf63Q6NUN7 778 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 KYAT3Q6YP21 454 aaKnown RBP9.25□□□□□ -0.93
SMC1A-203ENST00000428014 ARMCX6Q7L4S7 300 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 NLRP8Q86W28 1048 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 RHOT1Q8IXI2 618 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 CACTIN-AS1Q8N1I8 211 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 NPWQ8N729 165 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 NSMCE1Q8WV22 266 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 MAML1Q92585 1016 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 ARRDC3Q96B67 414 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 HDAC11Q96DB2 347 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 ELF4Q99607 663 aaPredicted RBP9.25□□□□□ -0.93
SMC1A-203ENST00000428014 CHP1Q99653 195 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 SUV39H2Q9H5I1 410 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 SP110Q9HB58 689 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 GDF3Q9NR23 364 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 TM7SF3Q9NS93 570 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 RPL26L1Q9UNX3 145 aaKnown RBP9.25□□□□□ -0.93
SMC1A-203ENST00000428014 FCF1Q9Y324 198 aaKnown RBP9.25□□□□□ -0.93
SMC1A-203ENST00000428014 PCDHGA1Q9Y5H4 931 aa9.25□□□□□ -0.93
SMC1A-203ENST00000428014 ARID1BQ8NFD5 2236 aaPredicted RBP9.25□□□□□ -0.93
SMC1A-203ENST00000428014 TMEM110-MUSTN1A8MSY1 372 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 TLR4O00206 839 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 TRAFD1O14545 582 aaPredicted RBP9.24□□□□□ -0.93
SMC1A-203ENST00000428014 PJA2O43164 708 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 MTSS1O43312 755 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 HOXC4P09017 264 aaPredicted RBP9.24□□□□□ -0.93
SMC1A-203ENST00000428014 KRT10P13645 584 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 PMLP29590 882 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 GARSP41250 739 aaKnown RBP9.24□□□□□ -0.93
SMC1A-203ENST00000428014 RABIFP47224 123 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 C21orf59P57076 290 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 COPS2P61201 443 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 BNC1Q01954 994 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 ILKQ13418 452 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
SMC1A-203ENST00000428014 IFI16Q16666 785 aaKnown RBP9.24□□□□□ -0.93
SMC1A-203ENST00000428014 UGP2Q16851 508 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 KIF19Q2TAC6 998 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 HLA-BQ31612 363 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 PPM1JQ5JR12 505 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 SLC9A4Q6AI14 798 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 PARS2Q7L3T8 475 aaKnown RBP9.24□□□□□ -0.93
SMC1A-203ENST00000428014 FAM124AQ86V42 546 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 CHST14Q8NCH0 376 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 SERAC1Q96JX3 654 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 RNF157Q96PX1 679 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 NUDCD1Q96RS6 583 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 SLC17A9Q9BYT1 436 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 MAGEB5Q9BZ81 275 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 RBSNQ9H1K0 784 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 TNKS2Q9H2K2 1166 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 GAREM1Q9H706 876 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 EBF2Q9HAK2 575 aa9.24□□□□□ -0.93
SMC1A-203ENST00000428014 USP29Q9HBJ7 922 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms