RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 SPC24Q8NBT2 197 aa15.04■□□□□ -0
RTN4-210ENST00000427710 FEM1CQ96JP0 617 aa15.04■□□□□ -0
RTN4-210ENST00000427710 WRAP53Q9BUR4 548 aaKnown RBP15.04■□□□□ -0
RTN4-210ENST00000427710 SLC32A1Q9H598 525 aa15.04■□□□□ -0
RTN4-210ENST00000427710 SUV39H2Q9H5I1 410 aa15.04■□□□□ -0
RTN4-210ENST00000427710 DMTF1Q9Y222 760 aa15.04■□□□□ -0
RTN4-210ENST00000427710 COQ6Q9Y2Z9 468 aa15.04■□□□□ -0
RTN4-210ENST00000427710 PCDHA13Q9Y5I0 950 aa15.04■□□□□ -0
RTN4-210ENST00000427710 PTPRBP23467 1997 aa15.04■□□□□ -0
RTN4-210ENST00000427710 KNTC1P50748 2209 aa15.03■□□□□ -0
RTN4-210ENST00000427710 AP1G1O43747 822 aa15.03■□□□□ -0
RTN4-210ENST00000427710 MMP20O60882 483 aa15.03■□□□□ -0
RTN4-210ENST00000427710 TOP3BO95985 862 aaKnown RBP15.03■□□□□ -0
RTN4-210ENST00000427710 KRT7P08729 469 aa15.03■□□□□ -0
RTN4-210ENST00000427710 CEACAM1P13688 526 aa15.03■□□□□ -0
RTN4-210ENST00000427710 KDELR1P24390 212 aa15.03■□□□□ -0
RTN4-210ENST00000427710 SCNN1BP51168 640 aa15.03■□□□□ -0
RTN4-210ENST00000427710 MAXP61244 160 aa15.03■□□□□ -0
RTN4-210ENST00000427710 RPS21P63220 83 aaKnown RBP15.03■□□□□ -0
RTN4-210ENST00000427710 PDK2Q15119 407 aa15.03■□□□□ -0
RTN4-210ENST00000427710 SHBQ15464 509 aa15.03■□□□□ -0
RTN4-210ENST00000427710 SLC45A4Q5BKX6 768 aa15.03■□□□□ -0
RTN4-210ENST00000427710 TMCO4Q5TGY1 634 aa15.03■□□□□ -0
RTN4-210ENST00000427710 GCNT7Q6ZNI0 430 aa15.03■□□□□ -0
RTN4-210ENST00000427710 GATAD2AQ86YP4 633 aa15.03■□□□□ -0
RTN4-210ENST00000427710 MFSD2AQ8NA29 543 aa15.03■□□□□ -0
RTN4-210ENST00000427710 TMEM145Q8NBT3 493 aa15.03■□□□□ -0
RTN4-210ENST00000427710 PANX2Q96RD6 677 aa15.03■□□□□ -0
RTN4-210ENST00000427710 SLC17A9Q9BYT1 436 aa15.03■□□□□ -0
RTN4-210ENST00000427710 CPEB1Q9BZB8 566 aaKnown RBP15.03■□□□□ -0
RTN4-210ENST00000427710 RCOR3Q9P2K3 495 aaPredicted RBP15.03■□□□□ -0
RTN4-210ENST00000427710 SEPT3Q9UH03 358 aa15.03■□□□□ -0
RTN4-210ENST00000427710 INTUQ9ULD6 942 aa15.03■□□□□ -0
RTN4-210ENST00000427710 TPX2Q9ULW0 747 aaKnown RBP15.03■□□□□ -0
RTN4-210ENST00000427710 A0A1B0GTQ1 180 aa15.02■□□□□ -0
RTN4-210ENST00000427710 LRRD1A4D1F6 860 aa15.02■□□□□ -0
RTN4-210ENST00000427710 RCCD1A6NED2 376 aa15.02■□□□□ -0
RTN4-210ENST00000427710 UPK3BL1B0FP48 263 aa15.02■□□□□ -0
RTN4-210ENST00000427710 UPK3BL2E5RIL1 263 aa15.02■□□□□ -0
RTN4-210ENST00000427710 LCA5LO95447 670 aa15.02■□□□□ -0
RTN4-210ENST00000427710 KRT1P04264 644 aa15.02■□□□□ -0
RTN4-210ENST00000427710 COMTP21964 271 aa15.02■□□□□ -0
RTN4-210ENST00000427710 HNRNPA2B1P22626 353 aaKnown RBP15.02■□□□□ -0
RTN4-210ENST00000427710 XPAP23025 273 aaPredicted RBP15.02■□□□□ -0
RTN4-210ENST00000427710 AKT2P31751 481 aa15.02■□□□□ -0
RTN4-210ENST00000427710 SERPINB6P35237 376 aa15.02■□□□□ -0
RTN4-210ENST00000427710 NUDT1P36639 197 aa15.02■□□□□ -0
RTN4-210ENST00000427710 ARHGAP25P42331 645 aa15.02■□□□□ -0
RTN4-210ENST00000427710 CCT8P50990 548 aa15.02■□□□□ -0
RTN4-210ENST00000427710 SIM1P81133 766 aaPredicted RBP15.02■□□□□ -0
RTN4-210ENST00000427710 FOXK2Q01167 660 aa15.02■□□□□ -0
RTN4-210ENST00000427710 GBE1Q04446 702 aa15.02■□□□□ -0
RTN4-210ENST00000427710 SLC10A2Q12908 348 aaPredicted RBP15.02■□□□□ -0
RTN4-210ENST00000427710 BNIP3Q12983 259 aa15.02■□□□□ -0
RTN4-210ENST00000427710 SLC14A1Q13336 389 aa15.02■□□□□ -0
RTN4-210ENST00000427710 ZNF235Q14590 738 aa15.02■□□□□ -0
RTN4-210ENST00000427710 RFTN1Q14699 578 aaPredicted RBP15.02■□□□□ -0
RTN4-210ENST00000427710 PAFAH1B3Q15102 231 aaKnown RBP15.02■□□□□ -0
RTN4-210ENST00000427710 LLGL1Q15334 1064 aa15.02■□□□□ -0
RTN4-210ENST00000427710 KIAA1161Q6NSJ0 714 aa15.02■□□□□ -0
RTN4-210ENST00000427710 RAD9BQ6WBX8 426 aa15.02■□□□□ -0
RTN4-210ENST00000427710 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.02■□□□□ -0
RTN4-210ENST00000427710 OR13H1Q8NG92 308 aa15.02■□□□□ -0
RTN4-210ENST00000427710 RAB7BQ96AH8 199 aa15.02■□□□□ -0
RTN4-210ENST00000427710 SKA1Q96BD8 255 aa15.02■□□□□ -0
RTN4-210ENST00000427710 RNF25Q96BH1 459 aaPredicted RBP15.02■□□□□ -0
RTN4-210ENST00000427710 FAF2Q96CS3 445 aa15.02■□□□□ -0
RTN4-210ENST00000427710 KLHDC7BQ96G42 594 aa15.02■□□□□ -0
RTN4-210ENST00000427710 ELF4Q99607 663 aaPredicted RBP15.02■□□□□ -0
RTN4-210ENST00000427710 ZNF670Q9BS34 389 aa15.02■□□□□ -0
RTN4-210ENST00000427710 NT5MQ9NPB1 228 aa15.02■□□□□ -0
RTN4-210ENST00000427710 PCDH12Q9NPG4 1184 aa15.02■□□□□ -0
RTN4-210ENST00000427710 GDF3Q9NR23 364 aa15.02■□□□□ -0
RTN4-210ENST00000427710 DKK3Q9UBP4 350 aa15.02■□□□□ -0
RTN4-210ENST00000427710 PCDHB9Q9Y5E1 797 aa15.02■□□□□ -0
RTN4-210ENST00000427710 SPEGQ15772 3267 aa15.02□□□□□ -0.01
RTN4-210ENST00000427710 PLXNB3Q9ULL4 1909 aa15.02□□□□□ -0.01
RTN4-210ENST00000427710 CHD8Q9HCK8 2581 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 POM121BA6NF01 834 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 AREL1O15033 823 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 TSPAN6O43657 245 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 ZNF883P0CG24 379 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 THEGLP0DJG4 465 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 SPINK2P20155 84 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 CYLC1P35663 651 aaPredicted RBP15.01□□□□□ -0.01
RTN4-210ENST00000427710 CSNK1DP48730 415 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 FOXC1Q12948 553 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 SGCGQ13326 291 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 CFAP58Q5T655 872 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 NPNTQ6UXI9 565 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 PTAR1Q7Z6K3 402 aaPredicted RBP15.01□□□□□ -0.01
RTN4-210ENST00000427710 MAP7D3Q8IWC1 876 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 CCDC170Q8IYT3 715 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 PAF1Q8N7H5 531 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 ACRBPQ8NEB7 543 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 CXorf40AQ8TE69 158 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 RHBDD1Q8TEB9 315 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 BMFQ96LC9 184 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 ZNF599Q96NL3 588 aa15.01□□□□□ -0.01
RTN4-210ENST00000427710 RNF157Q96PX1 679 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms