RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 TOP3BO95985 862 aaKnown RBP26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 PTPN2P17706 415 aa26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 CES1P23141 567 aa26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 DDX6P26196 483 aaKnown RBP eCLIP26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 HOXA9P31269 272 aa26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 CSKP41240 450 aa26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 SF3A3Q12874 501 aaKnown RBP eCLIP26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 IFT88Q13099 833 aa26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 ZC3HC1Q86WB0 502 aaKnown RBP26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 ARMC2Q8NEN0 867 aa26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 TCEAL4Q96EI5 215 aa26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 EXOC2Q96KP1 924 aa26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 NSMCE3Q96MG7 304 aa26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 RHOJQ9H4E5 214 aa26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 VPS28Q9UK41 221 aa26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 STARD13Q9Y3M8 1113 aa26.84■■□□□ 1.89
SH3GL3-202ENST00000427482 ABCG1P45844 678 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 SCNN1BP51168 640 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 UGP2Q16851 508 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 MPPE1Q53F39 396 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 GPR158Q5T848 1215 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 KYAT3Q6YP21 454 aaKnown RBP26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 NLRP9Q7RTR0 991 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 MFN1Q8IWA4 741 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 DDI1Q8WTU0 396 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 PTPRN2Q92932 1015 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 NUDCD1Q96RS6 583 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 GPR22Q99680 433 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 FAM167BQ9BTA0 163 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 SMG9Q9H0W8 520 aaKnown RBP26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 SCUBE2Q9NQ36 999 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 DNMT3BQ9UBC3 853 aaKnown RBP26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 DCDC2Q9UHG0 476 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 CLASP2O75122 1294 aaKnown RBP26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 MOSPD3O75425 235 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 TMCC1O94876 653 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 NDST3O95803 873 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 EPCAMP16422 314 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 HADHAP40939 763 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 THOC5Q13769 683 aaKnown RBP26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 GALNT3Q14435 633 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 MPP7Q5T2T1 576 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 LINGO4Q6UY18 593 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 CMC1Q7Z7K0 106 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 DCAF4L2Q8NA75 395 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 OR13J1Q8NGT2 312 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 BHMTQ93088 406 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 GGT7Q9UJ14 662 aa26.83■■□□□ 1.89
SH3GL3-202ENST00000427482 MYO7AQ13402 2215 aa26.82■■□□□ 1.88
SH3GL3-202ENST00000427482 GABRB3P28472 473 aa26.82■■□□□ 1.88
SH3GL3-202ENST00000427482 INSCQ1MX18 579 aa26.82■■□□□ 1.88
SH3GL3-202ENST00000427482 INO80DQ53TQ3 878 aaPredicted RBP26.82■■□□□ 1.88
SH3GL3-202ENST00000427482 PPM1JQ5JR12 505 aa26.82■■□□□ 1.88
SH3GL3-202ENST00000427482 RNF43Q68DV7 783 aa26.82■■□□□ 1.88
SH3GL3-202ENST00000427482 YTHDF3Q7Z739 585 aaKnown RBP26.82■■□□□ 1.88
SH3GL3-202ENST00000427482 DENND6AQ8IWF6 608 aa26.82■■□□□ 1.88
SH3GL3-202ENST00000427482 VPS51Q9UID3 782 aa26.82■■□□□ 1.88
SH3GL3-202ENST00000427482 LDB2O43679 373 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 AHSGP02765 367 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 RHOP08100 348 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 SLC1A2P43004 574 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 MPP1Q00013 466 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 GRM3Q14832 879 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 TEAD2Q15562 447 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 CMTM8Q8IZV2 173 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 C2CD4AQ8NCU7 369 aaPredicted RBP26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 SH3RF2Q8TEC5 729 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 LHX3Q9UBR4 397 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 EMCNQ9ULC0 261 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 ARIH1Q9Y4X5 557 aaPredicted RBP26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 E2F8A0AVK6 867 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 MPOP05164 745 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 HNRNPA1P09651 372 aaKnown RBP eCLIP26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 BGNP21810 368 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 CTBP1Q13363 440 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 LAMB3Q13751 1172 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 N4BP2L1Q5TBK1 243 aaPredicted RBP26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 ZNF470Q6ECI4 717 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 NEPROQ6NW34 567 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 HTATIP2Q9BUP3 242 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 TASP1Q9H6P5 420 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 ATG2AQ2TAZ0 1938 aa26.81■■□□□ 1.88
SH3GL3-202ENST00000427482 GRXCR1A8MXD5 290 aa26.8■■□□□ 1.88
SH3GL3-202ENST00000427482 KLF11O14901 512 aa26.8■■□□□ 1.88
SH3GL3-202ENST00000427482 ARHGAP15Q53QZ3 475 aa26.8■■□□□ 1.88
SH3GL3-202ENST00000427482 FYB2Q5VWT5 728 aa26.8■■□□□ 1.88
SH3GL3-202ENST00000427482 OTOAQ7RTW8 1153 aa26.8■■□□□ 1.88
SH3GL3-202ENST00000427482 RNF135Q8IUD6 432 aa26.8■■□□□ 1.88
SH3GL3-202ENST00000427482 LEMD2Q8NC56 503 aa26.8■■□□□ 1.88
SH3GL3-202ENST00000427482 ACVR1CQ8NER5 493 aa26.8■■□□□ 1.88
SH3GL3-202ENST00000427482 TDRD1Q9BXT4 1180 aaKnown RBP26.8■■□□□ 1.88
SH3GL3-202ENST00000427482 CAB39LQ9H9S4 337 aa26.8■■□□□ 1.88
SH3GL3-202ENST00000427482 SIRPGQ9P1W8 387 aa26.8■■□□□ 1.88
SH3GL3-202ENST00000427482 CCL26Q9Y258 94 aa26.8■■□□□ 1.88
SH3GL3-202ENST00000427482 BIRC5O15392 142 aa26.79■■□□□ 1.88
SH3GL3-202ENST00000427482 KIAA0754O94854 1291 aa26.79■■□□□ 1.88
SH3GL3-202ENST00000427482 AVPR1AP37288 418 aa26.79■■□□□ 1.88
SH3GL3-202ENST00000427482 CSRP3P50461 194 aa26.79■■□□□ 1.88
SH3GL3-202ENST00000427482 SLC5A9Q2M3M2 681 aa26.79■■□□□ 1.88
SH3GL3-202ENST00000427482 KIAA0408Q6ZU52 694 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms