RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 SOX13Q9UN79 622 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 TCRBV9S1A1TA0A576 114 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 PIAS1O75925 651 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 BAG2O95816 211 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 LRG1P02750 347 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 ETS2P15036 469 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 PSMB4P28070 264 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 POLD3Q15054 466 aaPredicted RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 LIN52Q52LA3 116 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 CFAP157Q5JU67 520 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 NADSYN1Q6IA69 706 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 SDCCAG8Q86SQ7 713 aaPredicted RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 C14orf80Q86SX3 495 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 TTC7BQ86TV6 843 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 CHSY1Q86X52 802 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 TMC8Q8IU68 726 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 HJURPQ8NCD3 748 aaPredicted RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 GIPC2Q8TF65 315 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 MZB1Q8WU39 189 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 MRPS31Q92665 395 aaKnown RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 BADQ92934 168 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 OTUB2Q96DC9 234 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 KLF6Q99612 283 aaPredicted RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 TTC1Q99614 292 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 MCOLN1Q9GZU1 580 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 LSM7Q9UK45 103 aaKnown RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 MTO1Q9Y2Z2 717 aaKnown RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 MFHAS1Q9Y4C4 1052 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 IKBKGQ9Y6K9 419 aa8.64□□□□□ -1.03
SH3D19-204ENST00000427414 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.64□□□□□ -1.03
SH3D19-204ENST00000427414 TYW5A2RUC4 315 aaKnown RBP8.63□□□□□ -1.03
SH3D19-204ENST00000427414 C2orf71A6NGG8 1288 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 B2RBV5 119 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 H3BNC9 293 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 CXCL14O95715 111 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 GLUD1P00367 558 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 IL1BP01584 269 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 SNRPAP09012 282 aaKnown RBP8.63□□□□□ -1.03
SH3D19-204ENST00000427414 CNPP09543 421 aaKnown RBP8.63□□□□□ -1.03
SH3D19-204ENST00000427414 CCNFP41002 786 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 CSNK1DP48730 415 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 PLK1P53350 603 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 CSE1LP55060 971 aaKnown RBP8.63□□□□□ -1.03
SH3D19-204ENST00000427414 NSUN2Q08J23 767 aaKnown RBP eCLIP8.63□□□□□ -1.03
SH3D19-204ENST00000427414 NIPAL4Q0D2K0 466 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 INO80DQ53TQ3 878 aaPredicted RBP8.63□□□□□ -1.03
SH3D19-204ENST00000427414 PCID2Q5JVF3 399 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 MARC1Q5VT66 337 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 SDHAF4Q5VUM1 108 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 TMEM150AQ86TG1 271 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 ANKMY2Q8IV38 441 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 RAB3IL1Q8TBN0 382 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 ARNTL2Q8WYA1 636 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 PAFAH2Q99487 392 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 ZBED2Q9BTP6 218 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 CCSER2Q9H7U1 834 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 ARMCX1Q9P291 453 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 SLC17A7Q9P2U7 560 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 ATXN10Q9UBB4 475 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 ARHGAP26Q9UNA1 814 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 E2F8A0AVK6 867 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 TGM5O43548 720 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 MYCP01106 439 aaPredicted RBP8.63□□□□□ -1.03
SH3D19-204ENST00000427414 INHBAP08476 426 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 ANPEPP15144 967 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 ZBTB17Q13105 803 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 INSCQ1MX18 579 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 GRTP1Q5TC63 336 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 C6orf163Q5TEZ5 329 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 RANBP10Q6VN20 620 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 UNC5AQ6ZN44 842 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 TRIM74Q86UV6 250 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 TRIM73Q86UV7 250 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 CNTN4Q8IWV2 1026 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 CNTD1Q8N815 330 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 KLHL23Q8NBE8 558 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 SPPL3Q8TCT6 385 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 USP13Q92995 863 aaPredicted RBP8.63□□□□□ -1.03
SH3D19-204ENST00000427414 SKA1Q96BD8 255 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 FEM1CQ96JP0 617 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 ZFRQ96KR1 1074 aaKnown RBP8.63□□□□□ -1.03
SH3D19-204ENST00000427414 RPRD1AQ96P16 312 aaPredicted RBP8.63□□□□□ -1.03
SH3D19-204ENST00000427414 CDCA3Q99618 268 aaPredicted RBP8.63□□□□□ -1.03
SH3D19-204ENST00000427414 CPNE1Q99829 537 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 TBL1YQ9BQ87 522 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 ECSITQ9BQ95 431 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 NACA2Q9H009 215 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 VPS11Q9H270 941 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 C10orf88Q9H8K7 445 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 TLR9Q9NR96 1032 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 NDE1Q9NXR1 346 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 VANGL2Q9ULK5 521 aa8.63□□□□□ -1.03
SH3D19-204ENST00000427414 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.62□□□□□ -1.03
SH3D19-204ENST00000427414 TRAV19A0A0A6YYK7 116 aa8.62□□□□□ -1.03
SH3D19-204ENST00000427414 GOLGA8MH3BSY2 632 aa8.62□□□□□ -1.03
SH3D19-204ENST00000427414 DFFAO00273 331 aa8.62□□□□□ -1.03
SH3D19-204ENST00000427414 FCHO1O14526 889 aa8.62□□□□□ -1.03
SH3D19-204ENST00000427414 ZNF197O14709 1029 aa8.62□□□□□ -1.03
SH3D19-204ENST00000427414 GREM1O60565 184 aa8.62□□□□□ -1.03
SH3D19-204ENST00000427414 DNAJC6O75061 913 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms