RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 RAD51Q06609 339 aa25.27■■□□□ 1.64
PTPMT1-203ENST00000426530 TARDBPQ13148 414 aaKnown RBP eCLIP25.27■■□□□ 1.64
PTPMT1-203ENST00000426530 NR1I3Q14994 352 aa25.27■■□□□ 1.64
PTPMT1-203ENST00000426530 ERMARDQ5T6L9 678 aa25.27■■□□□ 1.64
PTPMT1-203ENST00000426530 LUZP1Q86V48 1076 aa25.27■■□□□ 1.64
PTPMT1-203ENST00000426530 KLF15Q9UIH9 416 aa25.27■■□□□ 1.64
PTPMT1-203ENST00000426530 SPTY2D1-AS1A0A0U1RR47 76 aa25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 TIMP2P16035 220 aa25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 ACP1P24666 158 aa25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 IGFALSP35858 605 aa25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 PAPOLAP51003 745 aaKnown RBP25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 HS1BP3Q53T59 392 aa25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 PPP6R3Q5H9R7 873 aaPredicted RBP25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 RFX8Q6ZV50 586 aa25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 PARGQ86W56 976 aa25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 NPWQ8N729 165 aa25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 ZNF548Q8NEK5 533 aaPredicted RBP25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 ARHGEF26Q96DR7 871 aa25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 LENG8Q96PV6 779 aaPredicted RBP25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 CBX8Q9HC52 389 aa25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 IPO11Q9UI26 975 aaKnown RBP25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 MFHAS1Q9Y4C4 1052 aa25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 GPSM3Q9Y4H4 160 aa25.26■■□□□ 1.63
PTPMT1-203ENST00000426530 NBEAQ8NFP9 2946 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 DAPK3O43293 454 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 PRPSAP2O60256 369 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 PRAMEF11O60813 436 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 LRCH4O75427 683 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 RNF8O76064 485 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 GZMAP12544 262 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 ERCC2P18074 760 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 HTR7P34969 479 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 RGRP47804 291 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 NDST2P52849 883 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 PFN3P60673 137 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 INSM1Q01101 510 aaPredicted RBP25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 ARHGAP36Q6ZRI8 547 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 ZSCAN30Q86W11 494 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 DCP2Q8IU60 420 aaKnown RBP25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 ARHGAP12Q8IWW6 846 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 DENND6BQ8NEG7 585 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 FAM174AQ8TBP5 190 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 CXorf40AQ8TE69 158 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 IFT43Q96FT9 208 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 COQ6Q9Y2Z9 468 aa25.25■■□□□ 1.63
PTPMT1-203ENST00000426530 CSF2P04141 144 aa25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 PRKCGP05129 697 aa25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 CDK4P11802 303 aa25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 NME1P15531 152 aaKnown RBP25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 TCF4P15884 667 aa25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 HNRNPKP61978 463 aaKnown RBP eCLIP25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 SEMG2Q02383 582 aa25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 ILKQ13418 452 aa25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 TDRD12Q587J7 1177 aaKnown RBP25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 TP53INP2Q8IXH6 220 aa25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 RBFAQ8N0V3 343 aa25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 ASB12Q8WXK4 309 aa25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 CENPTQ96BT3 561 aa25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 APOLD1Q96LR9 279 aa25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 MBNL1Q9NR56 388 aaKnown RBP25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 NLGN3Q9NZ94 848 aa25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 DKK4Q9UBT3 224 aa25.24■■□□□ 1.63
PTPMT1-203ENST00000426530 ARHGAP42A6NI28 874 aa25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 K7ESM1 405 aa25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 DFFAO00273 331 aa25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 TM7SF2O76062 418 aa25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 XPAP23025 273 aaPredicted RBP25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 FANCCQ00597 558 aa25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 EIF2B5Q13144 721 aaKnown RBP25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 KLHL40Q2TBA0 621 aa25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 ZSWIM9Q86XI8 627 aa25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 TSEN2Q8NCE0 465 aaKnown RBP25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 FNIP1Q8TF40 1166 aa25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 HNRNPLLQ8WVV9 542 aaKnown RBP25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 CPEB1Q9BZB8 566 aaKnown RBP25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 TCEAL2Q9H3H9 227 aaPredicted RBP25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 DKK3Q9UBP4 350 aa25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 PNMA8BQ9ULN7 279 aaPredicted RBP25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 SCINQ9Y6U3 715 aa25.23■■□□□ 1.63
PTPMT1-203ENST00000426530 LY6G6EA0A0G2JKS1 128 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 H3BM21 787 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 SCAMP1O15126 338 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 BUB1BO60566 1050 aaPredicted RBP25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 ALPPL2P10696 532 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 JUNDP17535 347 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 SMTNL2Q2TAL5 461 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 COL28A1Q2UY09 1125 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 AFMIDQ63HM1 303 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 CAMK1DQ8IU85 385 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 TP53I13Q8NBR0 393 aaPredicted RBP25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 LMX1AQ8TE12 382 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 NXPE2Q96DL1 559 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 EDEM3Q9BZQ6 932 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 SUV39H2Q9H5I1 410 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 SP110Q9HB58 689 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 PCDH12Q9NPG4 1184 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 CWC15Q9P013 229 aaKnown RBP25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 U3KQA8 63 aa25.22■■□□□ 1.63
PTPMT1-203ENST00000426530 URB1O60287 2271 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms