RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 TXNDC16Q9P2K2 825 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 TBC1D14Q9P2M4 693 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 CLEC4EQ9ULY5 219 aa15.35■□□□□ 0.05
ACTB-204ENST00000425660 PDE4DIPQ5VU43 2346 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 NDST3O95803 873 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 ALDOAP04075 364 aaKnown RBP15.34■□□□□ 0.05
ACTB-204ENST00000425660 ALADP13716 330 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 PAMP19021 973 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 SCNN1BP51168 640 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 LIMK2P53671 638 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 CSE1LP55060 971 aaKnown RBP15.34■□□□□ 0.05
ACTB-204ENST00000425660 IL9RQ01113 521 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 LMAN2Q12907 356 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 CNGA3Q16281 694 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 LINGO4Q6UY18 593 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 ZNF771Q7L3S4 317 aaPredicted RBP15.34■□□□□ 0.05
ACTB-204ENST00000425660 NLRP9Q7RTR0 991 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 APCDD1Q8J025 514 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 TCP10LQ8TDR4 215 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 OTUB2Q96DC9 234 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 MAGEB18Q96M61 343 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 GDF15Q99988 308 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 CERS4Q9HA82 394 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 MLXIPLQ9NP71 852 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 PLK2Q9NYY3 685 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 LHX3Q9UBR4 397 aa15.34■□□□□ 0.05
ACTB-204ENST00000425660 NDUFAB1O14561 156 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 LDB2O43679 373 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 CEBPBP17676 345 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 ETV4P43268 484 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 ACVR1Q04771 509 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 DMTNQ08495 405 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 LAMB3Q13751 1172 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 RAB30Q15771 203 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 PLEKHG6Q3KR16 790 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 TSTD2Q5T7W7 516 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 PPP2R2DQ66LE6 453 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 RGS9BPQ6ZS82 235 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 STRA8Q7Z7C7 330 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 METTL3Q86U44 580 aaKnown RBP15.33■□□□□ 0.05
ACTB-204ENST00000425660 ARID3BQ8IVW6 561 aaPredicted RBP15.33■□□□□ 0.05
ACTB-204ENST00000425660 OR13J1Q8NGT2 312 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 EXOC2Q96KP1 924 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 SCUBE2Q9NQ36 999 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 SLC2A6Q9UGQ3 507 aa15.33■□□□□ 0.05
ACTB-204ENST00000425660 MRPS23Q9Y3D9 190 aaKnown RBP15.33■□□□□ 0.05
ACTB-204ENST00000425660 VAPBO95292 243 aa15.33■□□□□ 0.04
ACTB-204ENST00000425660 PRLP01236 227 aa15.33■□□□□ 0.04
ACTB-204ENST00000425660 DHRS4L1P0CG22 281 aa15.33■□□□□ 0.04
ACTB-204ENST00000425660 SPRP35270 261 aaPredicted RBP15.33■□□□□ 0.04
ACTB-204ENST00000425660 MAGEA12P43365 314 aa15.33■□□□□ 0.04
ACTB-204ENST00000425660 NRIP1P48552 1158 aa15.33■□□□□ 0.04
ACTB-204ENST00000425660 TMEM25Q86YD3 366 aa15.33■□□□□ 0.04
ACTB-204ENST00000425660 ZNF557Q8N988 423 aaPredicted RBP15.33■□□□□ 0.04
ACTB-204ENST00000425660 BRSK1Q8TDC3 778 aa15.33■□□□□ 0.04
ACTB-204ENST00000425660 SMG7Q92540 1137 aaKnown RBP15.33■□□□□ 0.04
ACTB-204ENST00000425660 CDCA3Q99618 268 aaPredicted RBP15.33■□□□□ 0.04
ACTB-204ENST00000425660 NKX2-4Q9H2Z4 354 aa15.33■□□□□ 0.04
ACTB-204ENST00000425660 SFXN1Q9H9B4 322 aa15.33■□□□□ 0.04
ACTB-204ENST00000425660 IARS2Q9NSE4 1012 aaKnown RBP15.33■□□□□ 0.04
ACTB-204ENST00000425660 ABCB8Q9NUT2 735 aa15.33■□□□□ 0.04
ACTB-204ENST00000425660 MSRAQ9UJ68 235 aa15.33■□□□□ 0.04
ACTB-204ENST00000425660 INTS6Q9UL03 887 aaKnown RBP15.33■□□□□ 0.04
ACTB-204ENST00000425660 RIMKLBQ9ULI2 386 aa15.33■□□□□ 0.04
ACTB-204ENST00000425660 GRID1Q9ULK0 1009 aa15.33■□□□□ 0.04
ACTB-204ENST00000425660 TIMM44O43615 452 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 MT-CO1P00395 513 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 DRD4P21917 467 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 HLA-FP30511 346 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 CD70P32970 193 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 CRHR1P34998 444 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 SLC20A2Q08357 652 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 PDK4Q16654 411 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 ZSCAN26Q16670 478 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 FSTL4Q6MZW2 842 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 NCEH1Q6PIU2 408 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 LVRNQ6Q4G3 990 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 CDHR3Q6ZTQ4 885 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 VN1R2Q8NFZ6 395 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 GDAP1Q8TB36 358 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 ITFG1Q8TB96 612 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 ZNF473Q8WTR7 871 aaKnown RBP15.32■□□□□ 0.04
ACTB-204ENST00000425660 IRF7Q92985 503 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 SRPK1Q96SB4 655 aaKnown RBP15.32■□□□□ 0.04
ACTB-204ENST00000425660 SPHK2Q9NRA0 654 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 MARK1Q9P0L2 795 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 ATG2AQ2TAZ0 1938 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 MIA3Q5JRA6 1907 aa15.32■□□□□ 0.04
ACTB-204ENST00000425660 CCDC78A2IDD5 438 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 COPEO14579 308 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 CCT5P48643 541 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 CSNK1DP48730 415 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 RHOAP61586 193 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 SEPT6Q14141 434 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 GALNT3Q14435 633 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 CBX2Q14781 532 aaPredicted RBP15.31■□□□□ 0.04
ACTB-204ENST00000425660 SMAD1Q15797 465 aaKnown RBP15.31■□□□□ 0.04
ACTB-204ENST00000425660 UGP2Q16851 508 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 KIAA0408Q6ZU52 694 aa15.31■□□□□ 0.04
ACTB-204ENST00000425660 ADGRG2Q8IZP9 1017 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms