RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.89□□□□□ -1.63
CKS1BP6-201ENST00000424932 RBM22Q9NW64 420 aaKnown RBP eCLIP4.89□□□□□ -1.63
CKS1BP6-201ENST00000424932 TMEM161AQ9NX61 479 aa4.89□□□□□ -1.63
CKS1BP6-201ENST00000424932 XPR1Q9UBH6 696 aa4.89□□□□□ -1.63
CKS1BP6-201ENST00000424932 SFMBT1Q9UHJ3 866 aa4.89□□□□□ -1.63
CKS1BP6-201ENST00000424932 CDH22Q9UJ99 828 aa4.89□□□□□ -1.63
CKS1BP6-201ENST00000424932 GABRQQ9UN88 632 aa4.89□□□□□ -1.63
CKS1BP6-201ENST00000424932 MAGED2Q9UNF1 606 aaPredicted RBP4.89□□□□□ -1.63
CKS1BP6-201ENST00000424932 SSX2IPQ9Y2D8 614 aa4.89□□□□□ -1.63
CKS1BP6-201ENST00000424932 INPP5FQ9Y2H2 1132 aa4.89□□□□□ -1.63
CKS1BP6-201ENST00000424932 PCDHB5Q9Y5E4 795 aa4.89□□□□□ -1.63
CKS1BP6-201ENST00000424932 WASF2Q9Y6W5 498 aa4.89□□□□□ -1.63
CKS1BP6-201ENST00000424932 SCN5AQ14524 2016 aa4.89□□□□□ -1.63
CKS1BP6-201ENST00000424932 LOC285095A0A1B0GVY8 99 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 CCDC189A1A4V9 331 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 RGSL1A5PLK6 1076 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 TMEM88BA6NKF7 163 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 MEI4A8MW99 385 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 DCXO43602 365 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 BUD23O43709 281 aaKnown RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 PEX1O43933 1283 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 TBC1D4O60343 1298 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 DLX3O60479 287 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 PRAMEF11O60813 436 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 PMPCBO75439 489 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 FGF1P05230 155 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 CHRNGP07510 517 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 RBP1P09455 135 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 LTA4HP09960 611 aaKnown RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 ATXN1LP0C7T5 689 aaKnown RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 ZDHHC11BP0C7U3 371 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 PIM1P11309 404 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 CKBP12277 381 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 PRKAR2AP13861 404 aaKnown RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 TFEBP19484 476 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 HLA-DPA1P20036 260 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 OGNP20774 298 aaKnown RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 FGFR3P22607 806 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 MPSTP25325 297 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 YWHAQP27348 245 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 PIK3R1P27986 724 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 CCND3P30281 292 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 GMPRP36959 345 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 ABCG1P45844 678 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 PSMD8P48556 350 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 PGFP49763 221 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 ACLYP53396 1101 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 NAGLUP54802 743 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 TAS2R39P59534 338 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 NAA20P61599 178 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 IRX1P78414 480 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 SLC25A3Q00325 362 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 DSG1Q02413 1049 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 PRKCZQ05513 592 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 TBL3Q12788 808 aaKnown RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 ELAVL2Q12926 359 aaKnown RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 DLG1Q12959 904 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 USP4Q13107 963 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 CTBP1Q13363 440 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 SERINC3Q13530 473 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 CCNIQ14094 377 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 CNGA3Q16281 694 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 FAM83EQ2M2I3 478 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 SLC9B1Q4ZJI4 515 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 SLC39A12Q504Y0 691 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 ARL13AQ5H913 290 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 VARS2Q5ST30 1063 aaKnown RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 VWA5B1Q5TIE3 1220 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 MARC1Q5VT66 337 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 AGAP9Q5VTM2 703 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 KLC3Q6P597 504 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 C16orf89Q6UX73 402 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 FRMD7Q6ZUT3 714 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 CHSY3Q70JA7 882 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 C14orf80Q86SX3 495 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 RNF180Q86T96 592 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 RTN4RL1Q86UN2 441 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 KBTBD6Q86V97 674 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 CILP2Q8IUL8 1156 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 SLC41A1Q8IVJ1 513 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 SLC22A9Q8IVM8 553 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 CEP97Q8IW35 865 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 MFN1Q8IWA4 741 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 DENND6AQ8IWF6 608 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 SCN4BQ8IWT1 228 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 PGAM4Q8N0Y7 254 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 PHTF2Q8N3S3 785 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 FBXW8Q8N3Y1 598 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 AFAP1L2Q8N4X5 818 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 KDM1BQ8NB78 822 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 TXNDC5Q8NBS9 432 aaKnown RBP4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 OR13J1Q8NGT2 312 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 GPR150Q8NGU9 434 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 ARRDC2Q8TBH0 407 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 SPPL2BQ8TCT7 592 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 USP33Q8TEY7 942 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 HASPINQ8TF76 798 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 DLG3Q92796 817 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 L3HYPDHQ96EM0 354 aa4.88□□□□□ -1.63
CKS1BP6-201ENST00000424932 HMCESQ96FZ2 354 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms