RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 DCDC2Q9UHG0 476 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 SSX2IPQ9Y2D8 614 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 CRYL1Q9Y2S2 319 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 KCTD3Q9Y597 815 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 MGEA5O60502 916 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 FGFR3P22607 806 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 GARSP41250 739 aaKnown RBP11.91□□□□□ -0.5
ERCC1-204ENST00000423698 MTTPP55157 894 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 CDH15P55291 814 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 KRT72Q14CN4 511 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 PITRM1Q5JRX3 1037 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 RBM20Q5T481 1227 aaKnown RBP11.91□□□□□ -0.5
ERCC1-204ENST00000423698 SLC15A3Q8IY34 581 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 OR10T2Q8NGX3 314 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 DCUN1D1Q96GG9 259 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 SENP6Q9GZR1 1112 aaPredicted RBP11.91□□□□□ -0.5
ERCC1-204ENST00000423698 RBM22Q9NW64 420 aaKnown RBP eCLIP11.91□□□□□ -0.52e-30■■□□□ 11.4
ERCC1-204ENST00000423698 GMPR2Q9P2T1 348 aaKnown RBP11.91□□□□□ -0.5
ERCC1-204ENST00000423698 FBXW11Q9UKB1 542 aa11.91□□□□□ -0.5
ERCC1-204ENST00000423698 SMIM35A0A1B0GVV1 85 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 GLTPD2A6NH11 291 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 M0QZ92 97 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 AP2A1O95782 977 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 HOXD12P35452 270 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 ALDH1A3P47895 512 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 OXCT1P55809 520 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 MYBPC1Q00872 1141 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 MAP7D1Q3KQU3 841 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 KYAT3Q6YP21 454 aaKnown RBP11.9□□□□□ -0.5
ERCC1-204ENST00000423698 AGMOQ6ZNB7 445 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 MFSD6LQ8IWD5 586 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 TTC39CQ8N584 583 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 DQX1Q8TE96 717 aaKnown RBP11.9□□□□□ -0.5
ERCC1-204ENST00000423698 CDRT15Q96T59 188 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 TRPV6Q9H1D0 765 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 COPS7BQ9H9Q2 264 aaPredicted RBP11.9□□□□□ -0.5
ERCC1-204ENST00000423698 HCSTQ9UBK5 93 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 AP4B1Q9Y6B7 739 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 G3V2L1 256 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 PRSS56P0CW18 603 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 NFKBIAP25963 317 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 CPOXP36551 454 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 ARL13BQ3SXY8 428 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 CNSTQ6PJW8 725 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 SLC7A5P1Q8MH63 180 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 FSTL5Q8N475 847 aaPredicted RBP11.9□□□□□ -0.5
ERCC1-204ENST00000423698 ATPAF2Q8N5M1 289 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.9□□□□□ -0.5
ERCC1-204ENST00000423698 CASP10Q92851 521 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 RCN3Q96D15 328 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 NT5MQ9NPB1 228 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 GDAP2Q9NXN4 497 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 GNEQ9Y223 722 aaKnown RBP11.9□□□□□ -0.5
ERCC1-204ENST00000423698 SLC27A5Q9Y2P5 690 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 PTGDR2Q9Y5Y4 395 aa11.9□□□□□ -0.5
ERCC1-204ENST00000423698 PAGE1O75459 146 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 CRTAMO95727 393 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 TSHRP16473 764 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 ITGAXP20702 1163 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 PTPRRQ15256 657 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 OGFOD2Q6N063 350 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 TMEM53Q6P2H8 277 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 NANOGNBQ7Z5D8 188 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 LRRC43Q8N309 656 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 TRIML2Q8N7C3 387 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 FCRL2Q96LA5 508 aaPredicted RBP11.89□□□□□ -0.51
ERCC1-204ENST00000423698 SLC39A3Q9BRY0 314 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 SLC39A8Q9C0K1 460 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 SEMA6AQ9H2E6 1030 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 TCF7L2Q9NQB0 619 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 CDH22Q9UJ99 828 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 CROTQ9UKG9 612 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 NOD1Q9Y239 953 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 TNPO2O14787 897 aaKnown RBP11.89□□□□□ -0.51
ERCC1-204ENST00000423698 KLF11O14901 512 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 NDUFB5O43674 189 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 DNAJA2O60884 412 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 CHRNA1P02708 482 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 COX4I1P13073 169 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 ZNF157P51786 506 aaPredicted RBP11.89□□□□□ -0.51
ERCC1-204ENST00000423698 CDH13P55290 713 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 PPP1R3AQ16821 1122 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 GEN1Q17RS7 908 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 LSM12Q3MHD2 195 aaKnown RBP11.89□□□□□ -0.51
ERCC1-204ENST00000423698 ZNF362Q5T0B9 420 aaPredicted RBP11.89□□□□□ -0.51
ERCC1-204ENST00000423698 PIM3Q86V86 326 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 ANKRD13BQ86YJ7 626 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 DCBLD1Q8N8Z6 715 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 FNDC8Q8TC99 324 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 EXOC2Q96KP1 924 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
ERCC1-204ENST00000423698 CPNE1Q99829 537 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 FRMD8Q9BZ67 464 aaPredicted RBP11.89□□□□□ -0.51
ERCC1-204ENST00000423698 CAAP1Q9H8G2 361 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 TNFRSF12AQ9NP84 129 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 POMPQ9Y244 141 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 COL1A2P08123 1366 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 SBF1O95248 1867 aa11.89□□□□□ -0.51
ERCC1-204ENST00000423698 NT5C1B-RDH14C9J2C7 533 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms