RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 PTK2BQ14289 1009 aa16.99■□□□□ 0.31
CCDC78-203ENST00000423653 FZD2Q14332 565 aa16.99■□□□□ 0.31
CCDC78-203ENST00000423653 ERMARDQ5T6L9 678 aa16.99■□□□□ 0.31
CCDC78-203ENST00000423653 PSTKQ8IV42 348 aaKnown RBP16.99■□□□□ 0.31
CCDC78-203ENST00000423653 ZNF548Q8NEK5 533 aaPredicted RBP16.99■□□□□ 0.31
CCDC78-203ENST00000423653 EXOC2Q96KP1 924 aa16.99■□□□□ 0.31
CCDC78-203ENST00000423653 KLF6Q99612 283 aaPredicted RBP16.99■□□□□ 0.31
CCDC78-203ENST00000423653 SNRNP25Q9BV90 132 aaKnown RBP16.99■□□□□ 0.31
CCDC78-203ENST00000423653 KLC2Q9H0B6 622 aa16.99■□□□□ 0.31
CCDC78-203ENST00000423653 LRRC19Q9H756 370 aa16.99■□□□□ 0.31
CCDC78-203ENST00000423653 MRPL47Q9HD33 250 aaKnown RBP16.99■□□□□ 0.31
CCDC78-203ENST00000423653 SCUBE2Q9NQ36 999 aa16.99■□□□□ 0.31
CCDC78-203ENST00000423653 NCKIPSDQ9NZQ3 722 aa16.99■□□□□ 0.31
CCDC78-203ENST00000423653 LHX3Q9UBR4 397 aa16.99■□□□□ 0.31
CCDC78-203ENST00000423653 CNOT8Q9UFF9 292 aaKnown RBP16.99■□□□□ 0.31
CCDC78-203ENST00000423653 APC2O95996 2303 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 TMEM191CA6NGB0 347 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 TOR1BO14657 336 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 PRAMEF11O60813 436 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 FTLP02792 175 aaPredicted RBP16.98■□□□□ 0.31
CCDC78-203ENST00000423653 CSF2P04141 144 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 CKMT1AP12532 417 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 PFN3P60673 137 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 TARDBPQ13148 414 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCDC78-203ENST00000423653 LRRC73Q5JTD7 316 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 RFX8Q6ZV50 586 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 ZNF571Q7Z3V5 609 aaPredicted RBP16.98■□□□□ 0.31
CCDC78-203ENST00000423653 CACTIN-AS1Q8N1I8 211 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 FAM181AQ8N9Y4 354 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 HCAR2Q8TDS4 363 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 BTN2A2Q8WVV5 523 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 CELF6Q96J87 481 aaKnown RBP16.98■□□□□ 0.31
CCDC78-203ENST00000423653 TUBGCP5Q96RT8 1024 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 NRSN2Q9GZP1 204 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 SP110Q9HB58 689 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 PDFQ9HBH1 243 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 PCSK1NQ9UHG2 260 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 RALYQ9UKM9 306 aaKnown RBP16.98■□□□□ 0.31
CCDC78-203ENST00000423653 CLCA2Q9UQC9 943 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 CSNK1G3Q9Y6M4 447 aa16.98■□□□□ 0.31
CCDC78-203ENST00000423653 TSPAN11A1L157 253 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 PIGNO95427 931 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 GP1BAP07359 652 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 JUNDP17535 347 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 CLDN6P56747 220 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 YPEL5P62699 121 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 INSM1Q01101 510 aaPredicted RBP16.97■□□□□ 0.31
CCDC78-203ENST00000423653 TDRD12Q587J7 1177 aaKnown RBP16.97■□□□□ 0.31
CCDC78-203ENST00000423653 ZNF542PQ5EBM4 170 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 PPP6R3Q5H9R7 873 aaPredicted RBP16.97■□□□□ 0.31
CCDC78-203ENST00000423653 FIGNQ5HY92 759 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 E4F1Q66K89 784 aaPredicted RBP16.97■□□□□ 0.31
CCDC78-203ENST00000423653 ZCCHC8Q6NZY4 707 aaKnown RBP16.97■□□□□ 0.31
CCDC78-203ENST00000423653 ERAP2Q6P179 960 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 BRAT1Q6PJG6 821 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 VPS36Q86VN1 386 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 VOPP1Q96AW1 172 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 APOLD1Q96LR9 279 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 ZNF641Q96N77 438 aaPredicted RBP16.97■□□□□ 0.31
CCDC78-203ENST00000423653 CINPQ9BW66 212 aaPredicted RBP16.97■□□□□ 0.31
CCDC78-203ENST00000423653 ATP13A3Q9H7F0 1226 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 ZWILCHQ9H900 591 aa16.97■□□□□ 0.31
CCDC78-203ENST00000423653 K7ESM1 405 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 DDX3XO00571 662 aaKnown RBP eCLIP16.96■□□□□ 0.31
CCDC78-203ENST00000423653 AQP9O43315 295 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 PALMO75781 387 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 SERPINA4P29622 427 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 MIPP30301 263 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 IGFALSP35858 605 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 RFTN1Q14699 578 aaPredicted RBP16.96■□□□□ 0.31
CCDC78-203ENST00000423653 ACAP1Q15027 740 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 CYTH1Q15438 398 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 CA9Q16790 459 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 MACC1Q6ZN28 852 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 DCBLD1Q8N8Z6 715 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 NETO2Q8NC67 525 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 CENPTQ96BT3 561 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 IQCDQ96DY2 449 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 TBATAQ96M53 351 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 PEBP4Q96S96 227 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 KCTD15Q96SI1 283 aaPredicted RBP16.96■□□□□ 0.31
CCDC78-203ENST00000423653 WRAP53Q9BUR4 548 aaKnown RBP16.96■□□□□ 0.31
CCDC78-203ENST00000423653 SUV39H2Q9H5I1 410 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 SPASTQ9UBP0 616 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 APOBEC3BQ9UH17 382 aaKnown RBP16.96■□□□□ 0.31
CCDC78-203ENST00000423653 BZW2Q9Y6E2 419 aaKnown RBP16.96■□□□□ 0.31
CCDC78-203ENST00000423653 AK5Q9Y6K8 562 aa16.96■□□□□ 0.31
CCDC78-203ENST00000423653 TDRD6O60522 2096 aaKnown RBP16.96■□□□□ 0.31
CCDC78-203ENST00000423653 H3BRJ5 948 aa16.95■□□□□ 0.3
CCDC78-203ENST00000423653 J3KR12 359 aa16.95■□□□□ 0.3
CCDC78-203ENST00000423653 INSIG1O15503 277 aa16.95■□□□□ 0.3
CCDC78-203ENST00000423653 MMP20O60882 483 aa16.95■□□□□ 0.3
CCDC78-203ENST00000423653 LRCH4O75427 683 aa16.95■□□□□ 0.3
CCDC78-203ENST00000423653 NEBLO76041 1014 aa16.95■□□□□ 0.3
CCDC78-203ENST00000423653 GIMD1P0DJR0 217 aa16.95■□□□□ 0.3
CCDC78-203ENST00000423653 TIMP2P16035 220 aa16.95■□□□□ 0.3
CCDC78-203ENST00000423653 PCK1P35558 622 aa16.95■□□□□ 0.3
CCDC78-203ENST00000423653 ARL4AP40617 200 aa16.95■□□□□ 0.3
CCDC78-203ENST00000423653 CSNK1DP48730 415 aa16.95■□□□□ 0.3
CCDC78-203ENST00000423653 HCAR3P49019 387 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms