RNA–Protein interactions for RNA: ENST00000420831.1

SEMA3F-204, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-204ENST00000420831 KRT35Q92764 455 aa8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 FAF2Q96CS3 445 aa8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 PANX2Q96RD6 677 aa8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 NUSAP1Q9BXS6 441 aaKnown RBP8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 CALN1Q9BXU9 219 aa8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 HDAC8Q9BY41 377 aa8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 RETREG1Q9H6L5 497 aa8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 TMEM9BQ9NQ34 198 aa8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 SAE1Q9UBE0 346 aaPredicted RBP8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 PNMA8BQ9ULN7 279 aaPredicted RBP8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 HPCAL4Q9UM19 191 aa8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 BTBD3Q9Y2F9 522 aa8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 ANKRD6Q9Y2G4 727 aa8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 COQ6Q9Y2Z9 468 aa8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 ALG6Q9Y672 507 aa8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 EPN1Q9Y6I3 576 aaPredicted RBP8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 SPAG17Q6Q759 2223 aa8.3□□□□□ -1.08
SEMA3F-204ENST00000420831 POM121BA6NF01 834 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 IGLON5A6NGN9 336 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 ARHGAP42A6NI28 874 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 LRRC72A6NJI9 287 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 A8MX80 341 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 EIF3CLB5ME19 914 aaKnown RBP8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 SH3BP5O60239 455 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 MMP20O60882 483 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 PALMO75781 387 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 PCDH8O95206 1070 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 POP4O95707 220 aaKnown RBP8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 PAK4O96013 591 aaPredicted RBP8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 PRNPP04156 253 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 KRT10P13645 584 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 GM2AP17900 193 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 CR2P20023 1033 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 ITGB7P26010 798 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 HTR7P34969 479 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 ARL4AP40617 200 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 CTSKP43235 329 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 RECQLP46063 649 aaPredicted RBP8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 NOP2P46087 812 aaKnown RBP8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 CCR5P51681 352 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 SNRPD1P62314 119 aaKnown RBP8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 IL10RBQ08334 325 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 LBRQ14739 615 aaKnown RBP8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 PAFAH1B3Q15102 231 aaKnown RBP8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 TCEAL1Q15170 157 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 ZNF805Q5CZA5 627 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 PPM1JQ5JR12 505 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 FAM46CQ5VWP2 391 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 PSAPL1Q6NUJ1 521 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 TMCO3Q6UWJ1 677 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 DSG4Q86SJ6 1040 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 PIP4P1Q86T03 277 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 PELI3Q8N2H9 469 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 TPCN2Q8NHX9 752 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 CEP76Q8TAP6 659 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 WNT2BQ93097 391 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 SERAC1Q96JX3 654 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 BMFQ96LC9 184 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 RNF157Q96PX1 679 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 KLF6Q99612 283 aaPredicted RBP8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 EIF3CQ99613 913 aaKnown RBP8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 CEP41Q9BYV8 373 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 GAREM1Q9H706 876 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 C10orf88Q9H8K7 445 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 MBNL1Q9NR56 388 aaKnown RBP8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 DTLQ9NZJ0 730 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 PCDHGC4Q9Y5F7 938 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 CHD5Q8TDI0 1954 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 NUP205Q92621 2012 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 ADAMTS9Q9P2N4 1935 aa8.29□□□□□ -1.08
SEMA3F-204ENST00000420831 FRYQ5TBA9 3013 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 CACNA1AO00555 2505 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 NCOR2Q9Y618 2525 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 SPAARA0A1B0GVQ0 90 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 LRRD1A4D1F6 860 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 TRAFD1O14545 582 aaPredicted RBP8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 AREL1O15033 823 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 KCNK5O95279 499 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 KRT1P04264 644 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 PECAM1P16284 738 aaPredicted RBP8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 DESP17661 470 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 SPINK2P20155 84 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 MAN1A1P33908 653 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 HOXD12P35452 270 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 SCNN1BP51168 640 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 AFF3P51826 1226 aaKnown RBP8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 NEK3P51956 506 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 DYNLT1P63172 113 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 NIPAL4Q0D2K0 466 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 GALNT2Q10471 571 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 BNIP3Q12983 259 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 HADHQ16836 314 aaKnown RBP8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 N4BP2L1Q5TBK1 243 aaPredicted RBP8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 KCTD16Q68DU8 428 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 FBXL19Q6PCT2 694 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 GCNT7Q6ZNI0 430 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 RFLNAQ6ZTI6 216 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 SRLQ86TD4 932 aa8.28□□□□□ -1.08
SEMA3F-204ENST00000420831 TTC7BQ86TV6 843 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms