RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TRABD2BA6NFA1 517 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 A6NNZ2 444 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 SIGLEC6O43699 453 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 PRAMEF11O60813 436 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 C1SP09871 688 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 TCF4P15884 667 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 TIMP2P16035 220 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 ACP1P24666 158 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 IL1R2P27930 398 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 RGRP47804 291 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 NDST2P52849 883 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 TPI1P60174 286 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 PFN3P60673 137 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 RHOAP61586 193 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 FANCCQ00597 558 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 KLHL30Q0D2K2 578 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 KLHL40Q2TBA0 621 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 ERMARDQ5T6L9 678 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 ZSCAN30Q86W11 494 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 TMPRSS12Q86WS5 348 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 ZSWIM9Q86XI8 627 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 TP53INP2Q8IXH6 220 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 OR4C6Q8NH72 309 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 FAM174AQ8TBP5 190 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 CENPTQ96BT3 561 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 IFT43Q96FT9 208 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 CELF6Q96J87 481 aaKnown RBP11.18□□□□□ -0.62
SSBP3-206ENST00000420121 NSMCE3Q96MG7 304 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 CPEB1Q9BZB8 566 aaKnown RBP11.18□□□□□ -0.62
SSBP3-206ENST00000420121 DHX35Q9H5Z1 703 aaKnown RBP11.18□□□□□ -0.62
SSBP3-206ENST00000420121 CCDC86Q9H6F5 360 aaKnown RBP11.18□□□□□ -0.62
SSBP3-206ENST00000420121 DKK3Q9UBP4 350 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 CNOT8Q9UFF9 292 aaKnown RBP11.18□□□□□ -0.62
SSBP3-206ENST00000420121 PCSK1NQ9UHG2 260 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 U3KQA8 63 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 RP1P56715 2156 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 IGSF10Q6WRI0 2623 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 URB1O60287 2271 aaKnown RBP11.18□□□□□ -0.62
SSBP3-206ENST00000420121 A0A1W2PQJ5 194 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 EIF3CLB5ME19 914 aaKnown RBP11.17□□□□□ -0.62
SSBP3-206ENST00000420121 EEF2KO00418 725 aaKnown RBP11.17□□□□□ -0.62
SSBP3-206ENST00000420121 BUB1BO60566 1050 aaPredicted RBP11.17□□□□□ -0.62
SSBP3-206ENST00000420121 PIGNO95427 931 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 IGSF6O95976 241 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 NME1P15531 152 aaKnown RBP11.17□□□□□ -0.62
SSBP3-206ENST00000420121 CKMT2P17540 419 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 ERCC2P18074 760 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 IGFALSP35858 605 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 PAPOLAP51003 745 aaKnown RBP11.17□□□□□ -0.62
SSBP3-206ENST00000420121 ZNF211Q13398 564 aaPredicted RBP11.17□□□□□ -0.62
SSBP3-206ENST00000420121 DPYSQ14117 519 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 ZNF542PQ5EBM4 170 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 TXNRD3NBQ6F5E7 133 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 ARHGAP36Q6ZRI8 547 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 RFX8Q6ZV50 586 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 PTAR1Q7Z6K3 402 aaPredicted RBP11.17□□□□□ -0.62
SSBP3-206ENST00000420121 ZNF354CQ86Y25 554 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 TP53I13Q8NBR0 393 aaPredicted RBP11.17□□□□□ -0.62
SSBP3-206ENST00000420121 DENND6BQ8NEG7 585 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 ZNF653Q96CK0 615 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 EIF3CQ99613 913 aaKnown RBP11.17□□□□□ -0.62
SSBP3-206ENST00000420121 MFRPQ9BY79 579 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 MBNL1Q9NR56 388 aaKnown RBP11.17□□□□□ -0.62
SSBP3-206ENST00000420121 CWC15Q9P013 229 aaKnown RBP11.17□□□□□ -0.62
SSBP3-206ENST00000420121 UBA2Q9UBT2 640 aaPredicted RBP11.17□□□□□ -0.62
SSBP3-206ENST00000420121 NENFQ9UMX5 172 aa11.17□□□□□ -0.62
SSBP3-206ENST00000420121 MUSKO15146 869 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 MMP20O60882 483 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 NEBLO76041 1014 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 SERPINC1P01008 464 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 CSF2P04141 144 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 RABIFP47224 123 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 HCAR3P49019 387 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 EIF2B5Q13144 721 aaKnown RBP11.16□□□□□ -0.62
SSBP3-206ENST00000420121 ILKQ13418 452 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 TMEM52BQ4KMG9 183 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 HES3Q5TGS1 186 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 TTC7BQ86TV6 843 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 DCP2Q8IU60 420 aaKnown RBP11.16□□□□□ -0.62
SSBP3-206ENST00000420121 PSTKQ8IV42 348 aaKnown RBP11.16□□□□□ -0.62
SSBP3-206ENST00000420121 TSEN2Q8NCE0 465 aaKnown RBP11.16□□□□□ -0.62
SSBP3-206ENST00000420121 RFFLQ8WZ73 363 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 SYN2Q92777 582 aaPredicted RBP11.16□□□□□ -0.62
SSBP3-206ENST00000420121 ARHGEF26Q96DR7 871 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 ETNK2Q9NVF9 386 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 MYO1AQ9UBC5 1043 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 GPSM3Q9Y4H4 160 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 SCINQ9Y6U3 715 aa11.16□□□□□ -0.62
SSBP3-206ENST00000420121 LOC400499M0QZD8 3231 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 A0A087X0T9 212 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 ARHGAP42A6NI28 874 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 NEMP1O14524 444 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 FPGTO14772 594 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 SCAMP1O15126 338 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 FFAR2O15552 330 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 PRPSAP2O60256 369 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 RNF8O76064 485 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 PEX11BO96011 259 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 GYPCP04921 128 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 FAM228BP0C875 321 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms