RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 CAPN8A6NHC0 703 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 LGALS16A8MUM7 142 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 CETN3O15182 167 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 STRNO43815 780 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 GCATO75600 419 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 LYPLA2O95372 231 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 GGPS1O95749 300 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 GNA14O95837 355 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 CCNE2O96020 404 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 EPB41P11171 864 aaKnown RBP4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 PRKAR1BP31321 381 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 PTGER1P34995 402 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 RENBPP51606 427 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 ARFIP2P53365 341 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 ITGA8P53708 1063 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 POLGP54098 1239 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 FKBP3Q00688 224 aaKnown RBP4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 UBXN1Q04323 297 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 DMP1Q13316 513 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 CYP1B1Q16678 543 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 EDRF1Q3B7T1 1238 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 CERCAMQ5T4B2 595 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 FAM102BQ5T8I3 360 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 DCAF12L1Q5VU92 463 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 SPECC1LQ69YQ0 1117 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 ANKRD40Q6AI12 368 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 CENPPQ6IPU0 288 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 SWSAP1Q6NVH7 229 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 METTL7BQ6UX53 244 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 ARMCX2Q7L311 632 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 OVCH2Q7RTZ1 564 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 GPR142Q7Z601 462 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 VSTM4Q8IW00 320 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 CCDC60Q8IWA6 550 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 SIRT6Q8N6T7 355 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNF366Q8N895 744 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 CCDC112Q8NEF3 446 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 MCPH1Q8NEM0 835 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 DNAJB14Q8TBM8 379 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 SCFD2Q8WU76 684 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 KIFAP3Q92845 792 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 RITA1Q96K30 269 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 CEP170P1Q96L14 293 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 IFT74Q96LB3 600 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNF830Q96NB3 372 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 PRR25Q96S07 402 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 TUBGCP2Q9BSJ2 902 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 HSD3B7Q9H2F3 369 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 AZI2Q9H6S1 392 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 ATP6V0A4Q9HBG4 840 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 OLFML3Q9NRN5 406 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 SACM1LQ9NTJ5 587 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 WRAP73Q9P2S5 460 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 NRBP1Q9UHY1 535 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 EXOC7Q9UPT5 735 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZMYM2Q9UBW7 1377 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 EMSYQ7Z589 1322 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 PASKQ96RG2 1323 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 CFAP69A5D8W1 941 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 TMEM150BA6NC51 233 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 SLC15A5A6NIM6 579 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 CCDC169A6NNP5 214 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 AKR1B15C9JRZ8 316 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 POC1B-GALNT4F8VUJ3 575 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 H0YCG3 227 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 H7C1Q1 480 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 TNPO2O14787 897 aaKnown RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 CCP110O43303 1012 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 SRGAP2O75044 1071 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 TUSC2O75896 110 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 RASSF9O75901 435 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 USP1O94782 785 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 GH1P01241 217 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 NR3C1P04150 777 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 TXNP10599 105 aaKnown RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 TGFB3P10600 412 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 SKILP12757 684 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 BRAFP15056 766 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 TRIM21P19474 475 aaKnown RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 EN2P19622 333 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 NR2F2P24468 414 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 NMT1P30419 496 aaKnown RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 ABCD1P33897 745 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 TCF7P36402 384 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 CASP5P51878 434 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 AGFG1P52594 562 aaKnown RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNF131P52739 623 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 SUMO3P55854 103 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 PEX3P56589 373 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 SUMO2P61956 95 aaKnown RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 SSBP2P81877 361 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 LRMPQ12912 555 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 GRB14Q14449 540 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNF268Q14587 947 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 EMC2Q15006 297 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 PPP2R5AQ15172 486 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 KNOP1Q1ED39 458 aaKnown RBP4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZCWPW2Q504Y3 356 aa4.06□□□□□ -1.76
HMGB3P20-201ENST00000417997 XKR3Q5GH77 459 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms