RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 MUSKO15146 869 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 TTI1O43156 1089 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 ADAM23O75077 832 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 SOCS5O75159 536 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 RNASEH2AO75792 299 aaKnown RBP8.55□□□□□ -1.04
TRIM48-201ENST00000417545 ZSCAN5DPP0CG00 497 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 ETS1P14921 441 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 COL9A1P20849 921 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 GKP32189 559 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 SLC8A1P32418 973 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 RGRP47804 291 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 NRLP54845 237 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 POLR2LP62875 67 aaKnown RBP8.55□□□□□ -1.04
TRIM48-201ENST00000417545 SATB1Q01826 763 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 MPP3Q13368 585 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 ENPP2Q13822 863 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 PTK6Q13882 451 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 CST6Q15828 149 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 TEX35Q5T0J7 233 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 NAPEPLDQ6IQ20 393 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 KIAA1211LQ6NV74 962 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 ERAP2Q6P179 960 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 PKN3Q6P5Z2 889 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 NCEH1Q6PIU2 408 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 ZNF572Q7Z3I7 529 aaPredicted RBP8.55□□□□□ -1.04
TRIM48-201ENST00000417545 KDELC2Q7Z4H8 507 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 PCGF5Q86SE9 256 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 JAMLQ86YT9 394 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 TMPRSS6Q8IU80 811 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 PGBD5Q8N414 524 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 CNTD1Q8N815 330 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 DNAAF3Q8N9W5 541 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 LPCAT1Q8NF37 534 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 RTP4Q96DX8 246 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 SPACA7Q96KW9 195 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 ZNF641Q96N77 438 aaPredicted RBP8.55□□□□□ -1.04
TRIM48-201ENST00000417545 KLHL32Q96NJ5 620 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 FCRL5Q96RD9 977 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 FICDQ9BVA6 458 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 COL25A1Q9BXS0 654 aaPredicted RBP8.55□□□□□ -1.04
TRIM48-201ENST00000417545 TPSD1Q9BZJ3 242 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 LRRC40Q9H9A6 602 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 USP29Q9HBJ7 922 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 NOD2Q9HC29 1040 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 VPS45Q9NRW7 570 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 PCDHGC4Q9Y5F7 938 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 RAI2Q9Y5P3 530 aa8.55□□□□□ -1.04
TRIM48-201ENST00000417545 ERI2A8K979 691 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 MID1O15344 667 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 RAD51CO43502 376 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 PI15O43692 258 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 SLU7O95391 586 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 MT-CYBP00156 380 aaPredicted RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 APRTP07741 180 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 CYP2A6P11509 494 aaPredicted RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 NDUFV2P19404 249 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 C5AR1P21730 350 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 ITGB7P26010 798 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 RPL22P35268 128 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 NEK3P51956 506 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 RPS14P62263 151 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 ZBTB16Q05516 673 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 CDK18Q07002 472 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 NIPAL4Q0D2K0 466 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 ZNF805Q5CZA5 627 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 FAM182AQ5T1J6 154 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 SYCP2LQ5T4T6 812 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 IZUMO3Q5VZ72 239 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 BRAT1Q6PJG6 821 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 TMEM92Q6UXU6 159 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 PRUNE1Q86TP1 453 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 LINC00523Q86TU6 105 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 FAM124AQ86V42 546 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 KBTBD6Q86V97 674 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 CAMK1DQ8IU85 385 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 HDDC3Q8N4P3 179 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 SLC25A41Q8N5S1 370 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 CAMKK1Q8N5S9 505 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 BBOF1Q8ND07 529 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 TMIEQ8NEW7 156 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 SPATA22Q8NHS9 363 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 IMP4Q96G21 291 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 SNF8Q96H20 258 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 TBL1YQ9BQ87 522 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 TRIM51Q9BSJ1 452 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 CPEB1Q9BZB8 566 aaKnown RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 RSPH9Q9H1X1 276 aaPredicted RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 DPH5Q9H2P9 285 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 SUV39H2Q9H5I1 410 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 EPHX3Q9H6B9 360 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 ETNK1Q9HBU6 452 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 HCN2Q9UL51 889 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 CHKBQ9Y259 395 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 ARIH1Q9Y4X5 557 aaPredicted RBP8.54□□□□□ -1.04
TRIM48-201ENST00000417545 PCDHB9Q9Y5E1 797 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 WASF2Q9Y6W5 498 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 F5P12259 2224 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 A0A1W2PP55 124 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 A0A1W2PQF6 199 aa8.54□□□□□ -1.04
TRIM48-201ENST00000417545 PRR23AA6NEV1 266 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms