RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 RASAL2Q9UJF2 1139 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 SUFUQ9UMX1 484 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 UBN2Q6ZU65 1347 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 TRAV34A0A0B4J273 112 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 GXYLT2A0PJZ3 443 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 PROB1E7EW31 1015 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 CES2O00748 559 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 USP12O75317 370 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 STAM2O75886 525 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 BCL10O95999 233 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 CSF1RP07333 972 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 TMEM225BP0DP42 221 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 CYP2A6P11509 494 aaPredicted RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 SCG2P13521 617 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 CHN1P15882 459 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 APOBEC3AP31941 199 aaPredicted RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 HPDP32754 393 aaPredicted RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 CAPZA2P47755 286 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 F2RL1P55085 397 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 TAS2R50P59544 299 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 FPGSQ05932 587 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 ACTN3Q08043 901 aaPredicted RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 DMWDQ09019 674 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 SEMA3BQ13214 749 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 PKN1Q16512 942 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 CYP4A22Q5TCH4 519 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 PPP1R42Q7Z4L9 355 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 ERC1Q8IUD2 1116 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 CMTM4Q8IZR5 234 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 NEK9Q8TD19 979 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 SNX19Q92543 992 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 ZNF512Q96ME7 567 aaPredicted RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 GDAP1L1Q96MZ0 367 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 RUNDC3BQ96NL0 473 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 GCNAQ96QF7 691 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 NEU1Q99519 415 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 TCF25Q9BQ70 676 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 TMEM168Q9H0V1 697 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 C11orf49Q9H6J7 331 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 AGO3Q9H9G7 860 aaKnown RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 ZBTB26Q9HCK0 441 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 PCMTD2Q9NV79 361 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 ARL15Q9NXU5 204 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 TAS2R10Q9NYW0 307 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 SUN2Q9UH99 717 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 CDK5RAP2Q96SN8 1893 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 CCDC187A0A096LP49 1063 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 MYOCOSA0A1B0GUC4 107 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 DRGXA6NNA5 263 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 UBE2Q2LH0YL09 131 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 INO80B-WBP1J3KQ70 363 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 TEX33O43247 280 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 SLC25A17O43808 307 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 TSPAN3O60637 253 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 TBCAO75347 108 aaKnown RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 GPANK1O95872 356 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 PENKP01210 267 aaPredicted RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 PLA2G1BP04054 148 aaKnown RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 IL4RP24394 825 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 MC5RP33032 325 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 ETV4P43268 484 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 LMAN1P49257 510 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 ADCY7P51828 1080 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 RRP1P56182 461 aaKnown RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 RAE1P78406 368 aaKnown RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 RBP5P82980 135 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 ADORA2A-AS1P86434 159 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 PPIL2Q13356 520 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 TOP3AQ13472 1001 aaPredicted RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 STILQ15468 1287 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 KCNMB1Q16558 191 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 AAK1Q2M2I8 961 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 AWAT1Q58HT5 328 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 KLHL35Q6PF15 583 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 SEM1Q6ZVN7 128 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 SFRP1Q8N474 314 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 NLGN4YQ8NFZ3 816 aaPredicted RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 OR56A1Q8NGH5 318 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 CASKIN2Q8WXE0 1202 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 NPIPB3Q92617 1050 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 ELOVL1Q9BW60 279 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 EIF2AQ9BY44 585 aaKnown RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 TTC12Q9H892 705 aaPredicted RBP2.67□□□□□ -1.98
MCF2-204ENST00000414978 LTB4R2Q9NPC1 389 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 THAP1Q9NVV9 213 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 BABAM1Q9NWV8 329 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 NINJ2Q9NZG7 142 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 GABRQQ9UN88 632 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 NIP7Q9Y221 180 aaKnown RBP eCLIP2.67□□□□□ -1.98
MCF2-204ENST00000414978 ASB3Q9Y575 518 aa2.67□□□□□ -1.98
MCF2-204ENST00000414978 TCRBV7S3A2A0A539 114 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 IPO8O15397 1037 aaKnown RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 HOXA3O43365 443 aaPredicted RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 SPAG6O75602 509 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 TSPAN9O75954 239 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 CHRM2P08172 466 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 SNRNP70P08621 437 aaKnown RBP2.66□□□□□ -1.98
MCF2-204ENST00000414978 SAT1P21673 171 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 FPR3P25089 353 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 PSMC2P35998 433 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms