RNA–Protein interactions for RNA: ENST00000412562.1

PHBP3-201, Transcript of prohibitin pseudogene 3, humanhuman

BASIC

Gene PHBP3, Length 819 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHBP3-201ENST00000412562 PCSK1NQ9UHG2 260 aa12.48□□□□□ -0.41
PHBP3-201ENST00000412562 IPO11Q9UI26 975 aaKnown RBP12.48□□□□□ -0.41
PHBP3-201ENST00000412562 CLCA2Q9UQC9 943 aa12.48□□□□□ -0.41
PHBP3-201ENST00000412562 COQ6Q9Y2Z9 468 aa12.48□□□□□ -0.41
PHBP3-201ENST00000412562 HELZ2Q9BYK8 2649 aaKnown RBP12.47□□□□□ -0.41
PHBP3-201ENST00000412562 WASH4PA8MWX3 477 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 OPA1O60313 960 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 BRINP1O60477 761 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 BUB1BO60566 1050 aaPredicted RBP12.47□□□□□ -0.41
PHBP3-201ENST00000412562 GCATO75600 419 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 CELA2BP08218 269 aaPredicted RBP12.47□□□□□ -0.41
PHBP3-201ENST00000412562 CDK4P11802 303 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 TNFAIP3P21580 790 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 GEMIN4P57678 1058 aaKnown RBP12.47□□□□□ -0.41
PHBP3-201ENST00000412562 RTP5Q14D33 572 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 TCEA2Q15560 299 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 CDKN3Q16667 212 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 CDCP2Q5VXM1 449 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 CRTC1Q6UUV9 634 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 ARHGAP36Q6ZRI8 547 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 ZNF571Q7Z3V5 609 aaPredicted RBP12.47□□□□□ -0.41
PHBP3-201ENST00000412562 PARGQ86W56 976 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 ZSWIM9Q86XI8 627 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 TP53INP2Q8IXH6 220 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 LMX1AQ8TE12 382 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 RAB7BQ96AH8 199 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 NSMCE3Q96MG7 304 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 KCTD15Q96SI1 283 aaPredicted RBP12.47□□□□□ -0.41
PHBP3-201ENST00000412562 NRSN2Q9GZP1 204 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 LRRC19Q9H756 370 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 PDFQ9HBH1 243 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
PHBP3-201ENST00000412562 RAI2Q9Y5P3 530 aa12.47□□□□□ -0.41
PHBP3-201ENST00000412562 CPED1A4D0V7 1026 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 ANKRD62A6NC57 917 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 ZSCAN5CA6NGD5 496 aaPredicted RBP12.46□□□□□ -0.41
PHBP3-201ENST00000412562 DDX3XO00571 662 aaKnown RBP eCLIP12.46□□□□□ -0.41
PHBP3-201ENST00000412562 IGSF6O95976 241 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 SKILP12757 684 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 JUNDP17535 347 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 PSMA2P25787 234 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 RABIFP47224 123 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 PAPOLAP51003 745 aaKnown RBP12.46□□□□□ -0.41
PHBP3-201ENST00000412562 YBEYP58557 167 aaPredicted RBP12.46□□□□□ -0.41
PHBP3-201ENST00000412562 TPI1P60174 286 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 HNRNPKP61978 463 aaKnown RBP eCLIP12.46□□□□□ -0.41
PHBP3-201ENST00000412562 KLHL40Q2TBA0 621 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 PARP15Q460N3 678 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 INO80DQ53TQ3 878 aaPredicted RBP12.46□□□□□ -0.41
PHBP3-201ENST00000412562 KCTD16Q68DU8 428 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 PLEKHA7Q6IQ23 1121 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 GUSBP11Q6P575 273 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 CYP4V2Q6ZWL3 525 aaPredicted RBP12.46□□□□□ -0.41
PHBP3-201ENST00000412562 DCP2Q8IU60 420 aaKnown RBP12.46□□□□□ -0.41
PHBP3-201ENST00000412562 CAMK1DQ8IU85 385 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 TP53I13Q8NBR0 393 aaPredicted RBP12.46□□□□□ -0.41
PHBP3-201ENST00000412562 ASB12Q8WXK4 309 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 FUBP1Q96AE4 644 aaKnown RBP12.46□□□□□ -0.41
PHBP3-201ENST00000412562 IFT43Q96FT9 208 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 NAP1L5Q96NT1 182 aaPredicted RBP12.46□□□□□ -0.41
PHBP3-201ENST00000412562 EPAS1Q99814 870 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 OSBPL1AQ9BXW6 950 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 SLC39A8Q9C0K1 460 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 DHX35Q9H5Z1 703 aaKnown RBP12.46□□□□□ -0.41
PHBP3-201ENST00000412562 HAUS4Q9H6D7 363 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 UBA2Q9UBT2 640 aaPredicted RBP12.46□□□□□ -0.41
PHBP3-201ENST00000412562 AP4E1Q9UPM8 1137 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 MFHAS1Q9Y4C4 1052 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 MGAQ8IWI9 3026 aa12.46□□□□□ -0.41
PHBP3-201ENST00000412562 KALRNO60229 2985 aa12.46□□□□□ -0.42
PHBP3-201ENST00000412562 RP1P56715 2156 aa12.46□□□□□ -0.42
PHBP3-201ENST00000412562 A0A1W2PNU3 283 aaPredicted RBP12.45□□□□□ -0.42
PHBP3-201ENST00000412562 TTC24A2A3L6 582 aaPredicted RBP12.45□□□□□ -0.42
PHBP3-201ENST00000412562 NEMP2A6NFY4 417 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 TMEM191CA6NGB0 347 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 AQP9O43315 295 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 PRAMEF11O60813 436 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 MPOP05164 745 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 TCF4P15884 667 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 TGM2P21980 687 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 EIF4A3P38919 411 aaKnown RBP12.45□□□□□ -0.42
PHBP3-201ENST00000412562 ADKP55263 362 aaKnown RBP12.45□□□□□ -0.42
PHBP3-201ENST00000412562 E2F1Q01094 437 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 WSCD2Q2TBF2 565 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 HS1BP3Q53T59 392 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 ARHGAP12Q8IWW6 846 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 NPWQ8N729 165 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 FAM181AQ8N9Y4 354 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 TSEN2Q8NCE0 465 aaKnown RBP12.45□□□□□ -0.42
PHBP3-201ENST00000412562 IFI44Q8TCB0 444 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 CXorf40AQ8TE69 158 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 SNRNP25Q9BV90 132 aaKnown RBP12.45□□□□□ -0.42
PHBP3-201ENST00000412562 LRRC61Q9BV99 259 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 CPEB1Q9BZB8 566 aaKnown RBP12.45□□□□□ -0.42
PHBP3-201ENST00000412562 CLPBQ9H078 707 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 CATSPERBQ9H7T0 1116 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 PCDH12Q9NPG4 1184 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 DKK3Q9UBP4 350 aa12.45□□□□□ -0.42
PHBP3-201ENST00000412562 PMS2P1A4D2B8 440 aa12.44□□□□□ -0.42
PHBP3-201ENST00000412562 GOLGA6L22H0YM25 854 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms