RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 LEPRP48357 1165 aaKnown RBP13.7□□□□□ -0.22
LIMS1-205ENST00000410093 CREMQ03060 361 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 ITKQ08881 620 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 ZNF235Q14590 738 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 GRM3Q14832 879 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 VEPH1Q14D04 833 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 DNAL1Q4LDG9 190 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 ALFQ53S48 1182 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 FSCBQ5H9T9 825 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 PPM1JQ5JR12 505 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 ICE2Q659A1 982 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 KIAA1841Q6NSI8 718 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 TFAP2DQ7Z6R9 452 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 CMC1Q7Z7K0 106 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 SETD3Q86TU7 594 aaPredicted RBP13.7□□□□□ -0.22
LIMS1-205ENST00000410093 ZNF461Q8TAF7 563 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 IGSF8Q969P0 613 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 PSMG2Q969U7 264 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 PABPC5Q96DU9 382 aaKnown RBP13.7□□□□□ -0.22
LIMS1-205ENST00000410093 IGSF21Q96ID5 467 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 RILPQ96NA2 401 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 NACA2Q9H009 215 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 MFSD1Q9H3U5 465 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 TRPM5Q9NZQ8 1165 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 VTI1BQ9UEU0 232 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 SEPT3Q9UH03 358 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 TAGLN3Q9UI15 199 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 MSRAQ9UJ68 235 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 FBXO5Q9UKT4 447 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 DNAJC16Q9Y2G8 782 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 SLC4A7Q9Y6M7 1214 aa13.7□□□□□ -0.22
LIMS1-205ENST00000410093 FAM95CA0A1B0GW59 222 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ILVBLA1L0T0 632 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 HGSO14964 777 aaPredicted RBP13.69□□□□□ -0.22
LIMS1-205ENST00000410093 SLC22A2O15244 555 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 CNTN5O94779 1100 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ABLIM3O94929 683 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 CBX6O95503 412 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 SOD2P04179 222 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ATF6P18850 670 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 KCNA4P22459 653 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 CD86P42081 329 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ALDH1A3P47895 512 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ACVR1Q04771 509 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 SLC10A7Q0GE19 358 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 RAB30Q15771 203 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 CNGA3Q16281 694 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ESRP1Q6NXG1 681 aaKnown RBP13.69□□□□□ -0.22
LIMS1-205ENST00000410093 KLC3Q6P597 504 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 RSPO2Q6UXX9 243 aaPredicted RBP13.69□□□□□ -0.22
LIMS1-205ENST00000410093 LONP2Q86WA8 852 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ZNF354CQ86Y25 554 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 KIF2BQ8N4N8 673 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 TTC9BQ8N6N2 239 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ARRDC2Q8TBH0 407 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 STYXQ8WUJ0 223 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 TIFAQ96CG3 184 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 IFT43Q96FT9 208 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ZNF419Q96HQ0 510 aaPredicted RBP13.69□□□□□ -0.22
LIMS1-205ENST00000410093 MRPL57Q9BQC6 102 aaKnown RBP13.69□□□□□ -0.22
LIMS1-205ENST00000410093 C1QTNF1Q9BXJ1 281 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ACE2Q9BYF1 805 aaPredicted RBP13.69□□□□□ -0.22
LIMS1-205ENST00000410093 DRC3Q9H069 523 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ILKAPQ9H0C8 392 aaPredicted RBP13.69□□□□□ -0.22
LIMS1-205ENST00000410093 TASP1Q9H6P5 420 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 STK38LQ9Y2H1 464 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 MYLKQ15746 1914 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 SCN5AQ14524 2016 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 GOLGA8QA0A0J9YX86 632 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 GOLGA8OA6NCC3 632 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ZNF840PA6NDX5 716 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 SPECC1L-ADORA2AF8WAN1 911 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 GOLGA8NF8WBI6 632 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 J3KR12 359 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 MAGEC1O60732 1142 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 HSPA4LO95757 839 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 TBX18O95935 607 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 PENKP01210 267 aaPredicted RBP13.69□□□□□ -0.22
LIMS1-205ENST00000410093 MMP2P08253 660 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 SERPINF2P08697 491 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 SLC35E2BP0CK96 405 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 PRDX6P30041 224 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ADSLP30566 484 aaPredicted RBP13.69□□□□□ -0.22
LIMS1-205ENST00000410093 DNAJB13P59910 316 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 IRX4P78413 519 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 NSUN2Q08J23 767 aaKnown RBP eCLIP13.69□□□□□ -0.22
LIMS1-205ENST00000410093 PRKAA1Q13131 559 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ITGA9Q13797 1035 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 FAM83EQ2M2I3 478 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 RALGPS1Q5JS13 557 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 WLSQ5T9L3 541 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 AGAP9Q5VTM2 703 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 HERC6Q8IVU3 1022 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 GPR150Q8NGU9 434 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 TTC8Q8TAM2 541 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 MCUR1Q96AQ8 359 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 ZNF512Q96ME7 567 aaPredicted RBP13.69□□□□□ -0.22
LIMS1-205ENST00000410093 HERC2P3Q9BVR0 1158 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 NMUR2Q9GZQ4 415 aa13.69□□□□□ -0.22
LIMS1-205ENST00000410093 MRPL46Q9H2W6 279 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms