RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 BUB1BO60566 1050 aaPredicted RBP17.92■□□□□ 0.46
LSM5-204ENST00000409909 PIGNO95427 931 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 AMPD1P23109 780 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 SLC25A11Q02978 314 aaKnown RBP17.92■□□□□ 0.46
LSM5-204ENST00000409909 ASTE1Q2TB18 679 aaPredicted RBP17.92■□□□□ 0.46
LSM5-204ENST00000409909 INAVAQ3KP66 663 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 Q6ZSR6 202 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 CPNE8Q86YQ8 564 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 VSTM4Q8IW00 320 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 SLC22A18ASQ8N1D0 253 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 EID2Q8N6I1 236 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 TSEN2Q8NCE0 465 aaKnown RBP17.92■□□□□ 0.46
LSM5-204ENST00000409909 RNF214Q8ND24 703 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 CSPG4P5Q96PW8 444 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 DKK3Q9UBP4 350 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 HS3ST3A1Q9Y663 406 aa17.92■□□□□ 0.46
LSM5-204ENST00000409909 PTPRBP23467 1997 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 COL5A1P20908 1838 aaPredicted RBP17.91■□□□□ 0.46
LSM5-204ENST00000409909 CFAP47Q6ZTR5 3102 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 H3BRJ5 948 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 PALMO75781 387 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 PROS1P07225 676 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 SGCGQ13326 291 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 ST3GAL2Q16842 350 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 KDM7AQ6ZMT4 941 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 OR8K1Q8NGG5 319 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 TEKT4Q8WW24 435 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 TSC1Q92574 1164 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 LENG8Q96PV6 779 aaPredicted RBP17.91■□□□□ 0.46
LSM5-204ENST00000409909 CALN1Q9BXU9 219 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 PACSIN1Q9BY11 444 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 PCDH18Q9HCL0 1135 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 GPR27Q9NS67 375 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 KLHL11Q9NVR0 708 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 FTSJ1Q9UET6 329 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 IPO11Q9UI26 975 aaKnown RBP17.91■□□□□ 0.46
LSM5-204ENST00000409909 PLXNB3Q9ULL4 1909 aa17.91■□□□□ 0.46
LSM5-204ENST00000409909 A6NNZ2 444 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 MYO1FO00160 1098 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 MUSKO15146 869 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 SDC3O75056 442 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 IL4RP24394 825 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 ARL4AP40617 200 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 CSNK1DP48730 415 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 IL10RBQ08334 325 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 SLC18A3Q16572 532 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 SRLQ86TD4 932 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 ZSCAN30Q86W11 494 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 CAMK1DQ8IU85 385 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 SLC25A45Q8N413 288 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 LZTR1Q8N653 840 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 ZNF564Q8TBZ8 553 aaPredicted RBP17.9■□□□□ 0.46
LSM5-204ENST00000409909 HCAR2Q8TDS4 363 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 ASB12Q8WXK4 309 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 NSMCE3Q96MG7 304 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 SUV39H2Q9H5I1 410 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 SP110Q9HB58 689 aa17.9■□□□□ 0.46
LSM5-204ENST00000409909 TDRD6O60522 2096 aaKnown RBP17.9■□□□□ 0.46
LSM5-204ENST00000409909 TSPAN11A1L157 253 aa17.89■□□□□ 0.45
LSM5-204ENST00000409909 MMP20O60882 483 aa17.89■□□□□ 0.45
LSM5-204ENST00000409909 LDOC1O95751 146 aaPredicted RBP17.89■□□□□ 0.45
LSM5-204ENST00000409909 DNAJC3Q13217 504 aa17.89■□□□□ 0.45
LSM5-204ENST00000409909 TRIM14Q14142 442 aa17.89■□□□□ 0.45
LSM5-204ENST00000409909 TPRG1LQ5T0D9 272 aa17.89■□□□□ 0.45
LSM5-204ENST00000409909 KYAT3Q6YP21 454 aaKnown RBP17.89■□□□□ 0.45
LSM5-204ENST00000409909 PTAR1Q7Z6K3 402 aaPredicted RBP17.89■□□□□ 0.45
LSM5-204ENST00000409909 ZSWIM9Q86XI8 627 aa17.89■□□□□ 0.45
LSM5-204ENST00000409909 FAM174AQ8TBP5 190 aa17.89■□□□□ 0.45
LSM5-204ENST00000409909 CENPTQ96BT3 561 aa17.89■□□□□ 0.45
LSM5-204ENST00000409909 CNDP2Q96KP4 475 aaKnown RBP17.89■□□□□ 0.45
LSM5-204ENST00000409909 ZNF641Q96N77 438 aaPredicted RBP17.89■□□□□ 0.45
LSM5-204ENST00000409909 CHP1Q99653 195 aa17.89■□□□□ 0.45
LSM5-204ENST00000409909 UCKL1Q9NWZ5 548 aa17.89■□□□□ 0.45
LSM5-204ENST00000409909 DSPP15924 2871 aaKnown RBP17.89■□□□□ 0.45
LSM5-204ENST00000409909 GOLGA4Q13439 2230 aaKnown RBP17.88■□□□□ 0.45
LSM5-204ENST00000409909 ENC1O14682 589 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 PEX11BO96011 259 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 CD48P09326 243 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 DGKAP23743 735 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 ARSEP51690 589 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 ADKP55263 362 aaKnown RBP17.88■□□□□ 0.45
LSM5-204ENST00000409909 NSUN2Q08J23 767 aaKnown RBP eCLIP17.88■□□□□ 0.45
LSM5-204ENST00000409909 SLC10A7Q0GE19 358 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 MMRN1Q13201 1228 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 FZD2Q14332 565 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 RFTN1Q14699 578 aaPredicted RBP17.88■□□□□ 0.45
LSM5-204ENST00000409909 GRM3Q14832 879 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 UGP2Q16851 508 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 TMEM52BQ4KMG9 183 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 ATP13A4Q4VNC1 1196 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 CCDC157Q569K6 752 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 ZNF542PQ5EBM4 170 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 TMCO3Q6UWJ1 677 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 CCNI2Q6ZMN8 369 aaPredicted RBP17.88■□□□□ 0.45
LSM5-204ENST00000409909 TMPRSS7Q7RTY8 843 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 MARCH9Q86YJ5 346 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 DCP2Q8IU60 420 aaKnown RBP17.88■□□□□ 0.45
LSM5-204ENST00000409909 KDF1Q8NAX2 398 aaPredicted RBP17.88■□□□□ 0.45
LSM5-204ENST00000409909 FAM71BQ8TC56 605 aa17.88■□□□□ 0.45
LSM5-204ENST00000409909 TUBGCP5Q96RT8 1024 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms