RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 C20orf27Q9GZN8 174 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 RASSF4Q9H2L5 321 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 ZNF358Q9NW07 568 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 SLC39A10Q9ULF5 831 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 ACTL7AQ9Y615 435 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 ZMPSTE24O75844 475 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 COL6A2P12110 1019 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 CES1P23141 567 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 LEPRP48357 1165 aaKnown RBP12.37□□□□□ -0.43
CLIP4-203ENST00000401617 LAMB3Q13751 1172 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 SETDB1Q15047 1291 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 CYTH1Q15438 398 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 MFSD6LQ8IWD5 586 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 FIBCD1Q8N539 461 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 ARL14EPQ8N8R7 260 aaPredicted RBP12.37□□□□□ -0.43
CLIP4-203ENST00000401617 CALML6Q8TD86 181 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 SPON2Q9BUD6 331 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 MFSD1Q9H3U5 465 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 DCTN4Q9UJW0 460 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 OR51B4Q9Y5P0 310 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 IRAK3Q9Y616 596 aa12.37□□□□□ -0.43
CLIP4-203ENST00000401617 HELZP42694 1942 aaKnown RBP12.37□□□□□ -0.43
CLIP4-203ENST00000401617 TSPAN3O60637 253 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 DNAJC6O75061 913 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 NDST3O95803 873 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 CD160O95971 181 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 SERPINE1P05121 402 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 SPATA31D3P0C874 917 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 SLC35E2BP0CK96 405 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 HDCP19113 662 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 PSMA3P25788 255 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 RGRP47804 291 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 ARFIP2P53365 341 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 IRX4P78413 519 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 IRF9Q00978 393 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 USP10Q14694 798 aaKnown RBP12.36□□□□□ -0.43
CLIP4-203ENST00000401617 HSF5Q4G112 596 aaPredicted RBP12.36□□□□□ -0.43
CLIP4-203ENST00000401617 TXNDC8Q6A555 127 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 ZNF470Q6ECI4 717 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 SPATA31D4Q6ZUB0 917 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 C10orf107Q8IVU9 208 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 LMNTD2Q8IXW0 634 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 TMEM151AQ8N4L1 468 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 KLHL23Q8NBE8 558 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 SP7Q8TDD2 431 aaPredicted RBP12.36□□□□□ -0.43
CLIP4-203ENST00000401617 ZNF395Q9H8N7 513 aaPredicted RBP12.36□□□□□ -0.43
CLIP4-203ENST00000401617 NOD2Q9HC29 1040 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 SMPD4Q9NXE4 827 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 KCNK4Q9NYG8 393 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 PCDH10Q9P2E7 1040 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 INSL6Q9Y581 213 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 NUMBLQ9Y6R0 609 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 MKI67P46013 3256 aaKnown RBP12.36□□□□□ -0.43
CLIP4-203ENST00000401617 CCDC195A0A1B0GUA6 201 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 FAM95CA0A1B0GW59 222 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 G3V2L1 256 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 INSIG1O15503 277 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 RASSF9O75901 435 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 CXCL14O95715 111 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 FGBP02675 491 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 CPA3P15088 417 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 KCNA4P22459 653 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 GRK2P25098 689 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 CD151P48509 253 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 SLC7A9P82251 487 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 ARF5P84085 180 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 PPIGQ13427 754 aaKnown RBP eCLIP12.36□□□□□ -0.43
CLIP4-203ENST00000401617 RNF219Q5W0B1 726 aaPredicted RBP12.36□□□□□ -0.43
CLIP4-203ENST00000401617 ASRGL1Q7L266 308 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 UBE2Q1Q7Z7E8 422 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 DNAJC5GQ8N7S2 189 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 HJURPQ8NCD3 748 aaPredicted RBP12.36□□□□□ -0.43
CLIP4-203ENST00000401617 GABPB2Q8TAK5 448 aaPredicted RBP12.36□□□□□ -0.43
CLIP4-203ENST00000401617 BRSK1Q8TDC3 778 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 SKA1Q96BD8 255 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 ERP27Q96DN0 273 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 ALG14Q96F25 216 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 IFT43Q96FT9 208 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 CINPQ9BW66 212 aaPredicted RBP12.36□□□□□ -0.43
CLIP4-203ENST00000401617 TMEM120AQ9BXJ8 343 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 ECT2Q9H8V3 914 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 TRPC7Q9HCX4 862 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 DNMT3BQ9UBC3 853 aaKnown RBP12.36□□□□□ -0.43
CLIP4-203ENST00000401617 ARIH1Q9Y4X5 557 aaPredicted RBP12.36□□□□□ -0.43
CLIP4-203ENST00000401617 CPQQ9Y646 472 aa12.36□□□□□ -0.43
CLIP4-203ENST00000401617 CFAP73A6NFT4 308 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 ATP5HO75947 161 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 HAUS5O94927 633 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 UNC5CO95185 931 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 C1RP00736 705 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 APOA4P06727 396 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 PFKLP17858 780 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 GABRR2P28476 465 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 CRABP2P29373 138 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 ARSDP51689 593 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 RAB10P61026 200 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 POU4F1Q01851 419 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 NSUN2Q08J23 767 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLIP4-203ENST00000401617 SLC12A1Q13621 1099 aa12.35□□□□□ -0.43
CLIP4-203ENST00000401617 CTC1Q2NKJ3 1217 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms