RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 MCMBPQ9BTE3 642 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 LMAN2LQ9H0V9 348 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 C12orf65Q9H3J6 166 aaKnown RBP25.87■■□□□ 1.73
CPNE1-205ENST00000401607 KIAA1522Q9P206 1035 aaPredicted RBP25.87■■□□□ 1.73
CPNE1-205ENST00000401607 SLC17A7Q9P2U7 560 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 NDUFAB1O14561 156 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 TM9SF1O15321 606 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 PAPLNO95428 1278 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 MT-CO1P00395 513 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 CES1P23141 567 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 DNAJC3Q13217 504 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 TSTD2Q5T7W7 516 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 PPP2R2DQ66LE6 453 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 TMEM25Q86YD3 366 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 ZNF473Q8WTR7 871 aaKnown RBP25.87■■□□□ 1.73
CPNE1-205ENST00000401607 C2orf49Q9BVC5 232 aaPredicted RBP25.87■■□□□ 1.73
CPNE1-205ENST00000401607 FAM107BQ9H098 131 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 PIDD1Q9HB75 910 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 ZMYM5Q9UJ78 669 aa25.87■■□□□ 1.73
CPNE1-205ENST00000401607 INTS6Q9UL03 887 aaKnown RBP25.87■■□□□ 1.73
CPNE1-205ENST00000401607 FCF1Q9Y324 198 aaKnown RBP25.87■■□□□ 1.73
CPNE1-205ENST00000401607 MRPS23Q9Y3D9 190 aaKnown RBP25.87■■□□□ 1.73
CPNE1-205ENST00000401607 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.86■■□□□ 1.73
CPNE1-205ENST00000401607 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.86■■□□□ 1.73
CPNE1-205ENST00000401607 VAPBO95292 243 aa25.86■■□□□ 1.73
CPNE1-205ENST00000401607 NDST3O95803 873 aa25.86■■□□□ 1.73
CPNE1-205ENST00000401607 TCF3P15923 654 aa25.86■■□□□ 1.73
CPNE1-205ENST00000401607 DRD4P21917 467 aa25.86■■□□□ 1.73
CPNE1-205ENST00000401607 KCNC3Q14003 757 aa25.86■■□□□ 1.73
CPNE1-205ENST00000401607 CBX2Q14781 532 aaPredicted RBP25.86■■□□□ 1.73
CPNE1-205ENST00000401607 LVRNQ6Q4G3 990 aa25.86■■□□□ 1.73
CPNE1-205ENST00000401607 ARID3BQ8IVW6 561 aaPredicted RBP25.86■■□□□ 1.73
CPNE1-205ENST00000401607 CNTN4Q8IWV2 1026 aa25.86■■□□□ 1.73
CPNE1-205ENST00000401607 ABHD8Q96I13 439 aa25.86■■□□□ 1.73
CPNE1-205ENST00000401607 MAGEB18Q96M61 343 aa25.86■■□□□ 1.73
CPNE1-205ENST00000401607 PAIP2Q9BPZ3 127 aaKnown RBP25.86■■□□□ 1.73
CPNE1-205ENST00000401607 TDRD1Q9BXT4 1180 aaKnown RBP25.86■■□□□ 1.73
CPNE1-205ENST00000401607 MKS1Q9NXB0 559 aa25.86■■□□□ 1.73
CPNE1-205ENST00000401607 MROH6A6NGR9 719 aa25.85■■□□□ 1.73
CPNE1-205ENST00000401607 PAPSS2O95340 614 aaPredicted RBP25.85■■□□□ 1.73
CPNE1-205ENST00000401607 PENKP01210 267 aaPredicted RBP25.85■■□□□ 1.73
CPNE1-205ENST00000401607 ALDOAP04075 364 aaKnown RBP25.85■■□□□ 1.73
CPNE1-205ENST00000401607 LIMK2P53671 638 aa25.85■■□□□ 1.73
CPNE1-205ENST00000401607 IL9RQ01113 521 aa25.85■■□□□ 1.73
CPNE1-205ENST00000401607 PLEKHG6Q3KR16 790 aa25.85■■□□□ 1.73
CPNE1-205ENST00000401607 TMC5Q6UXY8 1006 aa25.85■■□□□ 1.73
CPNE1-205ENST00000401607 CDHR3Q6ZTQ4 885 aa25.85■■□□□ 1.73
CPNE1-205ENST00000401607 LRRC34Q8IZ02 419 aa25.85■■□□□ 1.73
CPNE1-205ENST00000401607 ACDQ96AP0 544 aa25.85■■□□□ 1.73
CPNE1-205ENST00000401607 CHKBQ9Y259 395 aa25.85■■□□□ 1.73
CPNE1-205ENST00000401607 K7ERQ8 282 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 PRLP01236 227 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 PRKCGP05129 697 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 PAMP19021 973 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 FOXN2P32314 431 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 CSE1LP55060 971 aaKnown RBP25.84■■□□□ 1.73
CPNE1-205ENST00000401607 NSUN2Q08J23 767 aaKnown RBP eCLIP25.84■■□□□ 1.73
CPNE1-205ENST00000401607 ZSCAN26Q16670 478 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 QPCTQ16769 361 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 NCEH1Q6PIU2 408 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 FOXR1Q6PIV2 292 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 MICALCLQ6ZW33 695 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 LINC00597Q9H2U6 94 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 PCMTD2Q9NV79 361 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 COPEO14579 308 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 TPP1O14773 563 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 LDB2O43679 373 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 SPRP35270 261 aaPredicted RBP25.84■■□□□ 1.73
CPNE1-205ENST00000401607 PLK1P53350 603 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 RHOAP61586 193 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 RETSATQ6NUM9 610 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 OR13J1Q8NGT2 312 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 SRPK1Q96SB4 655 aaKnown RBP25.84■■□□□ 1.73
CPNE1-205ENST00000401607 GDF15Q99988 308 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 NSMCE4AQ9NXX6 385 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 GGT7Q9UJ14 662 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 MSRAQ9UJ68 235 aa25.84■■□□□ 1.73
CPNE1-205ENST00000401607 SIN3BO75182 1162 aa25.83■■□□□ 1.73
CPNE1-205ENST00000401607 ALADP13716 330 aa25.83■■□□□ 1.73
CPNE1-205ENST00000401607 HLA-FP30511 346 aa25.83■■□□□ 1.73
CPNE1-205ENST00000401607 ETV4P43268 484 aa25.83■■□□□ 1.73
CPNE1-205ENST00000401607 HHATQ5VTY9 493 aa25.83■■□□□ 1.73
CPNE1-205ENST00000401607 CNPY4Q8N129 248 aa25.83■■□□□ 1.73
CPNE1-205ENST00000401607 IRF7Q92985 503 aa25.83■■□□□ 1.73
CPNE1-205ENST00000401607 ISL2Q96A47 359 aa25.83■■□□□ 1.73
CPNE1-205ENST00000401607 TBC1D14Q9P2M4 693 aa25.83■■□□□ 1.73
CPNE1-205ENST00000401607 ARIH1Q9Y4X5 557 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-205ENST00000401607 PCDHGC4Q9Y5F7 938 aa25.83■■□□□ 1.73
CPNE1-205ENST00000401607 RAI2Q9Y5P3 530 aa25.83■■□□□ 1.73
CPNE1-205ENST00000401607 TCP11X1B4DZS4 312 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 SMAD6O43541 496 aaKnown RBP25.82■■□□□ 1.72
CPNE1-205ENST00000401607 ABCG1P45844 678 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 TRAF2Q12933 501 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 RAB30Q15771 203 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 ASTLQ6HA08 431 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-205ENST00000401607 NDUFAF2Q8N183 169 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 DCLK2Q8N568 766 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 BLOC1S5Q8TDH9 187 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 ACMSDQ8TDX5 336 aa25.82■■□□□ 1.72
CPNE1-205ENST00000401607 ATXN7L3BQ96GX2 97 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms