RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 NPEPPSL1A6NEC2 478 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 ACADSP16219 412 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 NPR3P17342 541 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 PDHA2P29803 388 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 ZNF268Q14587 947 aaPredicted RBP13.86□□□□□ -0.19
VAPA-202ENST00000400000 FNBP1LQ5T0N5 605 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 STXBP5Q5T5C0 1151 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 KIAA0408Q6ZU52 694 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 HIC2Q96JB3 615 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 A0A087X1B8 175 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 CCNYL3P0C7X3 344 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 SEC23AQ15436 765 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 DACT2Q5SW24 774 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 ZNF655Q8N720 491 aaPredicted RBP13.86□□□□□ -0.19
VAPA-202ENST00000400000 GANQ9H2C0 597 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 CRISPLD1Q9H336 500 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 RIOX1Q9H6W3 641 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 SF3B1O75533 1304 aaKnown RBP eCLIP13.86□□□□□ -0.198e-10■■■■■ 31
VAPA-202ENST00000400000 STBD1O95210 358 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 DNTTP04053 509 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 CXCR3P49682 368 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 PPP3CAQ08209 521 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 PRKG2Q13237 762 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 SF1Q15637 639 aaKnown RBP13.86□□□□□ -0.19
VAPA-202ENST00000400000 PAGE2BQ5JRK9 111 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 FAM220AQ7Z4H9 259 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 MAGEC3Q8TD91 643 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 ATP13A3Q9H7F0 1226 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 A0A1W2PQH9 124 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 GLRA2P23416 452 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 CASP9P55211 416 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 FAM182AQ5T1J6 154 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 GALNTL5Q7Z4T8 443 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 LDB1Q86U70 411 aaPredicted RBP13.86□□□□□ -0.19
VAPA-202ENST00000400000 GHDCQ8N2G8 530 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 APOL4Q9BPW4 351 aa13.86□□□□□ -0.19
VAPA-202ENST00000400000 NXF3Q9H4D5 531 aaKnown RBP13.86□□□□□ -0.19
VAPA-202ENST00000400000 CEP170BQ9Y4F5 1589 aaPredicted RBP13.86□□□□□ -0.19
VAPA-202ENST00000400000 DYTNA2CJ06 578 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 EME2A4GXA9 379 aaPredicted RBP13.85□□□□□ -0.19
VAPA-202ENST00000400000 PTPN4P29074 926 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 CACNA2D1P54289 1103 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 SMAD3P84022 425 aaKnown RBP13.85□□□□□ -0.19
VAPA-202ENST00000400000 PTPRNQ16849 979 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 PYDC2Q56P42 97 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 OFCC1Q8IZS5 231 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 SMPDL3BQ92485 455 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 THAP1Q9NVV9 213 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 PTGFRNQ9P2B2 879 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 SALL1Q9NSC2 1324 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 MRPS35P82673 323 aaKnown RBP13.85□□□□□ -0.19
VAPA-202ENST00000400000 CAMK1Q14012 370 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 GALNT5Q7Z7M9 940 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 PSTKQ8IV42 348 aaKnown RBP13.85□□□□□ -0.19
VAPA-202ENST00000400000 RTL3Q8N8U3 475 aaKnown RBP13.85□□□□□ -0.19
VAPA-202ENST00000400000 OR52L1Q8NGH7 329 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 RXFP1Q9HBX9 757 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 CLIC5Q9NZA1 410 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 CFAP97Q9P2B7 532 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 COL5A2P05997 1499 aaPredicted RBP13.85□□□□□ -0.19
VAPA-202ENST00000400000 C2orf71A6NGG8 1288 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 C1QTNF3-AMACRE9PGA6 284 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 SLCO1B7G3V0H7 640 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 ELFN1P0C7U0 828 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 NR2C2P49116 596 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 OLFML2AQ68BL7 652 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 DLK2Q6UY11 383 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 ZDHHC13Q8IUH4 622 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 DCBLD1Q8N8Z6 715 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 B3GALT6Q96L58 329 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 GAL3ST1Q99999 423 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 SNRNP25Q9BV90 132 aaKnown RBP13.85□□□□□ -0.19
VAPA-202ENST00000400000 B3GNT5Q9BYG0 378 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 ADGRA3Q8IWK6 1321 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 A0A088AWK7 358 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 TPST2O60704 377 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 GUCY1B2O75343 617 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 GZMAP12544 262 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 MAGP20916 626 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 ZNF10P21506 573 aaPredicted RBP13.85□□□□□ -0.19
VAPA-202ENST00000400000 MC4RP32245 332 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 GRIA4P48058 902 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 PTENP60484 403 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 USP41Q3LFD5 358 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 NEPROQ6NW34 567 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 ULK2Q8IYT8 1036 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 OR14C36Q8NHC7 312 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 LINGO1Q96FE5 620 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 BTBD10Q9BSF8 475 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 EHD4Q9H223 541 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 PTPRJQ12913 1337 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 CCNA2P20248 432 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 ZNF410Q86VK4 478 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 MCRS1Q96EZ8 462 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 QKIQ96PU8 341 aaKnown RBP eCLIP13.85□□□□□ -0.191e-14■■■■■ 35.1
VAPA-202ENST00000400000 VAV3Q9UKW4 847 aa13.85□□□□□ -0.19
VAPA-202ENST00000400000 A0A075B6Q4 140 aa13.84□□□□□ -0.19
VAPA-202ENST00000400000 RNASEH2AO75792 299 aaKnown RBP13.84□□□□□ -0.19
VAPA-202ENST00000400000 MATN4O95460 622 aa13.84□□□□□ -0.19
VAPA-202ENST00000400000 EFNA1P20827 205 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms