RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ZNF805Q5CZA5 627 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ANKRD20A2Q5SQ80 823 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ANKRD20A1Q5TYW2 823 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ANKRD20A3Q5VUR7 823 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 USP30Q70CQ3 517 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 KLHDC8BQ8IXV7 354 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 HDDC3Q8N4P3 179 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 MAIP1Q8WWC4 291 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 OXNAD1Q96HP4 312 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SPATA13Q96N96 652 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 TUBGCP5Q96RT8 1024 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 VAT1Q99536 393 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 OSBPL1AQ9BXW6 950 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 FAM126AQ9BYI3 521 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SLC25A51Q9H1U9 297 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 NEUROG2Q9H2A3 272 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ZSCAN32Q9NX65 697 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 FBXL12Q9NXK8 326 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 WSB2Q9NYS7 404 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 KLHL8Q9P2G9 620 aaPredicted RBP12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 TTLL3Q9Y4R7 772 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 PCDHGC4Q9Y5F7 938 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 MUC6Q6W4X9 2439 aa12.54□□□□□ -0.4
HLA-DQB1-203ENST00000399082 CFAP69A5D8W1 941 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SOCS5O75159 536 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 RNASEH2AO75792 299 aaKnown RBP12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 METTL18O95568 372 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 MT-CYBP00156 380 aaPredicted RBP12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 PDHA1P08559 390 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ZSCAN5DPP0CG00 497 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ETS1P14921 441 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 TIMP2P16035 220 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ITIH2P19823 946 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ACSL1P33121 698 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 CD86P42081 329 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 MAPK8P45983 427 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ITKQ08881 620 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 PTPRRQ15256 657 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 RALGPS1Q5JS13 557 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 LRRC73Q5JTD7 316 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 FAM46CQ5VWP2 391 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 KDELC1Q6UW63 502 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 PID1Q7Z2X4 250 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 FAM124AQ86V42 546 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SPOCK2Q92563 424 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ZNF641Q96N77 438 aaPredicted RBP12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SMIM14Q96QK8 99 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 FCRL5Q96RD9 977 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 RBM15Q96T37 977 aaKnown RBP eCLIP12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 MLPHQ9BV36 600 aaPredicted RBP12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 TDRD1Q9BXT4 1180 aaKnown RBP12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 HDAC8Q9BY41 377 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 GBA3Q9H227 469 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SUV39H2Q9H5I1 410 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ATP13A3Q9H7F0 1226 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 UBP1Q9NZI7 540 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 DKK3Q9UBP4 350 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 TRHDEQ9UKU6 1024 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 SCML1Q9UN30 329 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ZNF148Q9UQR1 794 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 DRG1Q9Y295 367 aaKnown RBP12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 NEU2Q9Y3R4 380 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 ABCA7Q8IZY2 2146 aa12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 TNRC6BQ9UPQ9 1833 aaKnown RBP12.53□□□□□ -0.4
HLA-DQB1-203ENST00000399082 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 C16orf96A6NNT2 1141 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PHF2O75151 1096 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ZNF217O75362 1048 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 GCATO75600 419 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PRKCGP05129 697 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ACADMP11310 421 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ADRB3P13945 408 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PSMB4P28070 264 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SERPINA4P29622 427 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 COILP38432 576 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ADPRHP54922 357 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RAD51Q06609 339 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 BCL2L1Q07817 233 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TTC31Q49AM3 519 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ERN2Q76MJ5 926 aaKnown RBP12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 GAB3Q8WWW8 586 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 MAGOHBQ96A72 148 aaKnown RBP12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TOE1Q96GM8 510 aaKnown RBP12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TRIB3Q96RU7 358 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 NAP1L3Q99457 506 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RSPH14Q9UHP6 348 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 GGT7Q9UJ14 662 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 FZD4Q9ULV1 537 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ITM2BQ9Y287 266 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PCDHGA2Q9Y5H1 932 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RAI2Q9Y5P3 530 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 R4GN57 208 aa12.52□□□□□ -0.41
HLA-DQB1-203ENST00000399082 LRRK1Q38SD2 2015 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 AREL1O15033 823 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SLC7A4O43246 635 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PLRG1O43660 514 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 OPHN1O60890 802 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 NEBLO76041 1014 aa12.51□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PGLSO95336 258 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms