RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 MAXP61244 160 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NSUN2Q08J23 767 aaKnown RBP eCLIP14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 GALNT2Q10471 571 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 FGL2Q14314 439 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ZNF235Q14590 738 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 LLGL1Q15334 1064 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TMEM259Q4ZIN3 620 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SETMARQ53H47 684 aaPredicted RBP14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 LRRC38Q5VT99 294 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NAPEPLDQ6IQ20 393 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ZSWIM9Q86XI8 627 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PLD5Q8N7P1 536 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 FEM1CQ96JP0 617 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 DESI2Q9BSY9 194 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TPX2Q9ULW0 747 aaKnown RBP14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 A0A0U1RQJ8 604 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 IGLON5A6NGN9 336 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 H0Y8X5 98 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 GIPC1O14908 333 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 AREL1O15033 823 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 VILLO15195 856 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 AP1G1O43747 822 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PAK4O96013 591 aaPredicted RBP14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CTSKP43235 329 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CSNK1DP48730 415 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 MARCKSL1P49006 195 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 C21orf59P57076 290 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PPM1JQ5JR12 505 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 FAM182AQ5T1J6 154 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 MARC1Q5VT66 337 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TPCN2Q8NHX9 752 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 RAB7BQ96AH8 199 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SLC17A9Q9BYT1 436 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 DTLQ9NZJ0 730 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 DKK3Q9UBP4 350 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 DMTF1Q9Y222 760 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 HEY1Q9Y5J3 304 aa14.24□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PRAMEF26H0Y7S4 382 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TSPAN6O43657 245 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CER1O95813 267 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PRKCGP05129 697 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CD59P13987 128 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 MMP13P45452 471 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CLDN2P57739 230 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 RPS21P63220 83 aaKnown RBP14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SEMG2Q02383 582 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 STAT4Q14765 748 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 GRM3Q14832 879 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 UGP2Q16851 508 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SLC9A4Q6AI14 798 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 KIAA1161Q6NSJ0 714 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 IL27RAQ6UWB1 636 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 MFSD7Q6UXD7 560 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NPNTQ6UXI9 565 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ERMP1Q7Z2K6 904 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 DAAM2Q86T65 1068 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 LRRC49Q8IUZ0 686 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TMEM145Q8NBT3 493 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 DEFB124Q8NES8 71 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ZNF641Q96N77 438 aaPredicted RBP14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TUBGCP5Q96RT8 1024 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 WRAP53Q9BUR4 548 aaKnown RBP14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ATP13A3Q9H7F0 1226 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TM7SF3Q9NS93 570 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 DDX56Q9NY93 547 aaKnown RBP14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PCDHGC4Q9Y5F7 938 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TRPM6Q9BX84 2022 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SHROOM3Q8TF72 1996 aa14.23□□□□□ -0.13
HLA-DQB1-202ENST00000399079 MED19A0JLT2 244 aaPredicted RBP14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TLR4O00206 839 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TRAFD1O14545 582 aaPredicted RBP14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 RAD51BO15315 384 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 MMP20O60882 483 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 KCNK5O95279 499 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 KRT10P13645 584 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CR2P20023 1033 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 HNRNPA2B1P22626 353 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SERPINA4P29622 427 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NUDT1P36639 197 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 RENBPP51606 427 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 VAV2P52735 878 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NAP1L1P55209 391 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 DYNLT1P63172 113 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 IL9RQ01113 521 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 BCL2L1Q07817 233 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 IFI16Q16666 785 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ODF2Q5BJF6 829 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CFAP58Q5T655 872 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PSAPL1Q6NUJ1 521 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 C11orf63Q6NUN7 778 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SPATS2Q86XZ4 545 aaKnown RBP14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 RFX6Q8HWS3 928 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 MFSD2AQ8NA29 543 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CCNYQ8ND76 341 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NSMCE1Q8WV22 266 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 KRT35Q92764 455 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CAMK1GQ96NX5 476 aa14.22□□□□□ -0.13
HLA-DQB1-202ENST00000399079 LGMNQ99538 433 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms